RNA–Protein interactions for RNA: ENST00000573994.1

RPA1-206, Transcript of replication protein A1, humanhuman

TSL 2

Gene RPA1, Length 844 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPA1-206ENST00000573994 FLI1Q01543 452 aaPredicted RBP6.85□□□□□ -1.31
RPA1-206ENST00000573994 ZFP69Q49AA0 526 aa6.85□□□□□ -1.31
RPA1-206ENST00000573994 OR4C5Q8NGB2 326 aa6.85□□□□□ -1.31
RPA1-206ENST00000573994 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
RPA1-206ENST00000573994 LINC00479Q96M42 142 aa6.85□□□□□ -1.31
RPA1-206ENST00000573994 LOC100131303A0A0U1RQF7 123 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 MAP1LC3B2A6NCE7 125 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 C16orf90A8MZG2 172 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 K7EQD1 137 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 PEX7O00628 323 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 IFNA7P01567 189 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 PFN1P07737 140 aaKnown RBP6.84□□□□□ -1.31
RPA1-206ENST00000573994 SRIP30626 198 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 LINC00315P59091 139 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 SRSF3P84103 164 aaKnown RBP6.84□□□□□ -1.31
RPA1-206ENST00000573994 SMUG1Q53HV7 270 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 NEGR1Q7Z3B1 354 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 SH2D6Q7Z4S9 175 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 Q86TA4 180 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 HIST1H2BAQ96A08 127 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 TCEAL7Q9BRU2 100 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 MAP1LC3BQ9GZQ8 125 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 CYTL1Q9NRR1 136 aa6.84□□□□□ -1.31
RPA1-206ENST00000573994 SIVA1O15304 175 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 ZNF345Q14585 488 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 DPPA3Q6W0C5 159 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 STOML3Q8TAV4 291 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 PTH2Q96A98 100 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 ARL2-SNX15V9GYD0 113 aa6.83□□□□□ -1.32
RPA1-206ENST00000573994 TRAV9-2A0A087WT02 112 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 IGHV3-73A0A0B4J1V6 119 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 A0A1B0GV50 99 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 FAM74A7A6NL05 159 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 HMSDA8MTL9 139 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 UMAD1C9J7I0 102 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 FHITP49789 147 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 ZNF876PQ49A33 203 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 PIK3CD-AS1Q5SR53 167 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 LYPD5Q6UWN5 251 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 SPATA12Q7Z6I5 190 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 WFDC10BQ8IUB3 73 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 NHLRC2Q8NBF2 726 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 OR11H4Q8NGC9 324 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 C9orf85Q96MD7 179 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 TXNDC17Q9BRA2 123 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 KRTAP17-1Q9BYP8 105 aa6.82□□□□□ -1.32
RPA1-206ENST00000573994 A0A0D9SG52 128 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 SEC11BP0C7V7 166 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 GATA1P15976 413 aaPredicted RBP6.81□□□□□ -1.32
RPA1-206ENST00000573994 EIF5AP63241 154 aaKnown RBP6.81□□□□□ -1.32
RPA1-206ENST00000573994 ZNF506Q5JVG8 444 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 CFAP126Q5VTH2 177 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 KCNRGQ8N5I3 272 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 ZFP30Q9Y2G7 519 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 TNFRSF18Q9Y5U5 241 aa6.81□□□□□ -1.32
RPA1-206ENST00000573994 IGKV3D-20A0A0C4DH25 116 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 PGPEP1LA6NFU8 196 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 RNASE3P12724 160 aaKnown RBP6.8□□□□□ -1.32
RPA1-206ENST00000573994 TIRAPP58753 221 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 CST9LP1Q5W188 147 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 COX8CQ7Z4L0 72 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 FAM213BQ8TBF2 198 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 ZC2HC1AQ96GY0 325 aa6.8□□□□□ -1.32
RPA1-206ENST00000573994 ZNF471Q9BX82 626 aaPredicted RBP6.8□□□□□ -1.32
RPA1-206ENST00000573994 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 H3BVH4 76 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 M0R036 132 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 RS1O15537 224 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 BCL2L11O43521 198 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
RPA1-206ENST00000573994 S100A4P26447 101 aaKnown RBP6.79□□□□□ -1.32
RPA1-206ENST00000573994 KRTAP10-2P60368 255 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 Q6ZRN7 208 aaPredicted RBP6.79□□□□□ -1.32
RPA1-206ENST00000573994 NFE4Q86UQ8 179 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 SLC25A29Q8N8R3 303 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 FMC1Q96HJ9 113 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 LY96Q9Y6Y9 160 aa6.79□□□□□ -1.32
RPA1-206ENST00000573994 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 TRBV6-1A0A0K0K1D8 114 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 KANTRA0A1W2PQU2 76 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 KRTAP9-7A8MTY7 169 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 B4DEV8 164 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 PAGE4O60829 102 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 SH2D1AO60880 128 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
RPA1-206ENST00000573994 EVI2AP22794 236 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 FUSP35637 526 aaKnown RBP eCLIP6.78□□□□□ -1.32
RPA1-206ENST00000573994 ASIPP42127 132 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 AKR1C3P42330 323 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 CRIP1P50238 77 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 UBE2G1P62253 170 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 RHOHQ15669 191 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 LGALSLQ3ZCW2 172 aaPredicted RBP6.78□□□□□ -1.32
RPA1-206ENST00000573994 ZFP2Q6ZN57 461 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 SFT2D1Q8WV19 159 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 PRADC1Q9BSG0 188 aa6.78□□□□□ -1.32
RPA1-206ENST00000573994 GRIFINA4D1Z8 144 aa6.77□□□□□ -1.33
RPA1-206ENST00000573994 A8MWV9 139 aa6.77□□□□□ -1.33
RPA1-206ENST00000573994 PFDN1O60925 122 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms