RNA–Protein interactions for RNA: ENST00000573867.1

SCARF1-207, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 939 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-207ENST00000573867 CFAP126Q5VTH2 177 aa19.12■□□□□ 0.65
SCARF1-207ENST00000573867 PTH2Q96A98 100 aa19.12■□□□□ 0.65
SCARF1-207ENST00000573867 UPK3BQ9BT76 320 aa19.12■□□□□ 0.65
SCARF1-207ENST00000573867 NBDYA0A0U1RRE5 68 aa19.11■□□□□ 0.65
SCARF1-207ENST00000573867 NKX2-5P52952 324 aaPredicted RBP19.11■□□□□ 0.65
SCARF1-207ENST00000573867 MLST8Q9BVC4 326 aa19.11■□□□□ 0.65
SCARF1-207ENST00000573867 GRIFINA4D1Z8 144 aa19.1■□□□□ 0.65
SCARF1-207ENST00000573867 GATA1P15976 413 aaPredicted RBP19.1■□□□□ 0.65
SCARF1-207ENST00000573867 ASIPP42127 132 aa19.1■□□□□ 0.65
SCARF1-207ENST00000573867 C11orf52Q96A22 123 aa19.1■□□□□ 0.65
SCARF1-207ENST00000573867 DERL1Q9BUN8 251 aa19.1■□□□□ 0.65
SCARF1-207ENST00000573867 Q9H8V8 135 aa19.1■□□□□ 0.65
SCARF1-207ENST00000573867 PKD1P98161 4303 aa19.09■□□□□ 0.65
SCARF1-207ENST00000573867 LOC100131303A0A0U1RQF7 123 aa19.09■□□□□ 0.65
SCARF1-207ENST00000573867 K7EQD1 137 aa19.09■□□□□ 0.65
SCARF1-207ENST00000573867 S100A9P06702 114 aaKnown RBP19.09■□□□□ 0.65
SCARF1-207ENST00000573867 S100A4P26447 101 aaKnown RBP19.09■□□□□ 0.65
SCARF1-207ENST00000573867 DNLZQ5SXM8 178 aa19.09■□□□□ 0.65
SCARF1-207ENST00000573867 TMSB15BA0A087X1C1 80 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 H3BVH4 76 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 GYPEP15421 78 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 MRPL23Q16540 153 aaKnown RBP19.08■□□□□ 0.64
SCARF1-207ENST00000573867 LINC01559Q495D7 138 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 BAGE2Q86Y30 109 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 KRTAP1-5Q9BYS1 174 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 IL36BQ9NZH7 164 aa19.08■□□□□ 0.64
SCARF1-207ENST00000573867 RPL35P42766 123 aaKnown RBP19.07■□□□□ 0.64
SCARF1-207ENST00000573867 LINC00336Q6ZUF6 198 aa19.07■□□□□ 0.64
SCARF1-207ENST00000573867 BOLA1Q9Y3E2 137 aa19.07■□□□□ 0.64
SCARF1-207ENST00000573867 IGHV3-73A0A0B4J1V6 119 aa19.06■□□□□ 0.64
SCARF1-207ENST00000573867 TEX46H3BTG2 121 aa19.06■□□□□ 0.64
SCARF1-207ENST00000573867 ARMS2P0C7Q2 107 aa19.06■□□□□ 0.64
SCARF1-207ENST00000573867 ALKAL2Q6UX46 152 aa19.06■□□□□ 0.64
SCARF1-207ENST00000573867 LYPD5Q6UWN5 251 aa19.05■□□□□ 0.64
SCARF1-207ENST00000573867 JPT2Q9H910 190 aa19.05■□□□□ 0.64
SCARF1-207ENST00000573867 A0A1B0GVY2 172 aa19.04■□□□□ 0.64
SCARF1-207ENST00000573867 RPL19P84098 196 aaKnown RBP19.04■□□□□ 0.64
SCARF1-207ENST00000573867 C1orf134Q5TEV5 83 aa19.04■□□□□ 0.64
SCARF1-207ENST00000573867 DNAH11Q96DT5 4516 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 MEF2BQ02080 365 aaPredicted RBP19.03■□□□□ 0.64
SCARF1-207ENST00000573867 DMRTA1Q5VZB9 504 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 NEGR1Q7Z3B1 354 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 SLC25A29Q8N8R3 303 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 PARLQ9H300 379 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 SCRT2Q9NQ03 307 aa19.03■□□□□ 0.64
SCARF1-207ENST00000573867 PRSS29PA6NIE9 313 aa19.02■□□□□ 0.64
SCARF1-207ENST00000573867 BCL2P10415 239 aa19.02■□□□□ 0.64
SCARF1-207ENST00000573867 SRIP30626 198 aa19.02■□□□□ 0.64
SCARF1-207ENST00000573867 PCNPQ8WW12 178 aaKnown RBP19.02■□□□□ 0.64
SCARF1-207ENST00000573867 TXNDC17Q9BRA2 123 aa19.02■□□□□ 0.64
SCARF1-207ENST00000573867 NXPH4O95158 308 aa19.01■□□□□ 0.63
SCARF1-207ENST00000573867 IGLV2-8P01709 118 aa19.01■□□□□ 0.63
SCARF1-207ENST00000573867 PIK3CD-AS1Q5SR53 167 aa19.01■□□□□ 0.63
SCARF1-207ENST00000573867 Q6ZSN1 163 aa19.01■□□□□ 0.63
SCARF1-207ENST00000573867 SAMD10Q9BYL1 202 aa19.01■□□□□ 0.63
SCARF1-207ENST00000573867 DYNC1H1Q14204 4646 aaKnown RBP19.01■□□□□ 0.63
SCARF1-207ENST00000573867 CENPWQ5EE01 88 aa19■□□□□ 0.63
SCARF1-207ENST00000573867 PRR27Q6MZM9 219 aa19■□□□□ 0.63
SCARF1-207ENST00000573867 UFSP1Q6NVU6 142 aa19■□□□□ 0.63
SCARF1-207ENST00000573867 PKHD1P08F94 4074 aa19■□□□□ 0.63
SCARF1-207ENST00000573867 RAB19A4D1S5 217 aa18.99■□□□□ 0.63
SCARF1-207ENST00000573867 CIDEAO60543 219 aa18.99■□□□□ 0.63
SCARF1-207ENST00000573867 IFNA1P01562 189 aa18.99■□□□□ 0.63
SCARF1-207ENST00000573867 TRBV6-4A0A1B0GX49 114 aa18.98■□□□□ 0.63
SCARF1-207ENST00000573867 A8MWV9 139 aa18.98■□□□□ 0.63
SCARF1-207ENST00000573867 C6orf223Q8N319 242 aa18.98■□□□□ 0.63
SCARF1-207ENST00000573867 VAX2Q9UIW0 290 aa18.98■□□□□ 0.63
SCARF1-207ENST00000573867 TRBV20OR9-2A0A075B6H5 130 aa18.97■□□□□ 0.63
SCARF1-207ENST00000573867 PDE6DO43924 150 aa18.97■□□□□ 0.63
SCARF1-207ENST00000573867 SIVA1O15304 175 aa18.96■□□□□ 0.63
SCARF1-207ENST00000573867 RHOHQ15669 191 aa18.96■□□□□ 0.63
SCARF1-207ENST00000573867 SOHLH1Q5JUK2 328 aa18.96■□□□□ 0.63
SCARF1-207ENST00000573867 ZFP2Q6ZN57 461 aa18.96■□□□□ 0.63
SCARF1-207ENST00000573867 PHLDA3Q9Y5J5 127 aa18.96■□□□□ 0.63
SCARF1-207ENST00000573867 MGST1P10620 155 aaKnown RBP18.95■□□□□ 0.62
SCARF1-207ENST00000573867 TTC32Q5I0X7 151 aa18.95■□□□□ 0.62
SCARF1-207ENST00000573867 MED9Q9NWA0 146 aa18.95■□□□□ 0.62
SCARF1-207ENST00000573867 Q9UF83 564 aa18.95■□□□□ 0.62
SCARF1-207ENST00000573867 M0R381 172 aa18.94■□□□□ 0.62
SCARF1-207ENST00000573867 CXCL1P09341 107 aa18.94■□□□□ 0.62
SCARF1-207ENST00000573867 SYT8Q8NBV8 401 aa18.94■□□□□ 0.62
SCARF1-207ENST00000573867 LYPD6BQ8NI32 183 aa18.94■□□□□ 0.62
SCARF1-207ENST00000573867 PRADC1Q9BSG0 188 aa18.94■□□□□ 0.62
SCARF1-207ENST00000573867 MED14OSP0DP75 135 aa18.93■□□□□ 0.62
SCARF1-207ENST00000573867 BLOC1S1P78537 153 aa18.93■□□□□ 0.62
SCARF1-207ENST00000573867 WFDC10BQ8IUB3 73 aa18.93■□□□□ 0.62
SCARF1-207ENST00000573867 SFRP2Q96HF1 295 aa18.93■□□□□ 0.62
SCARF1-207ENST00000573867 A0A1W2PPQ1 181 aa18.92■□□□□ 0.62
SCARF1-207ENST00000573867 TNP2Q05952 138 aa18.92■□□□□ 0.62
SCARF1-207ENST00000573867 OR10AG1Q8NH19 301 aa18.92■□□□□ 0.62
SCARF1-207ENST00000573867 A0A087WWL8 130 aa18.91■□□□□ 0.62
SCARF1-207ENST00000573867 CRYGDP07320 174 aa18.91■□□□□ 0.62
SCARF1-207ENST00000573867 GNG4P50150 75 aa18.91■□□□□ 0.62
SCARF1-207ENST00000573867 ZFP82Q8N141 532 aa18.91■□□□□ 0.62
SCARF1-207ENST00000573867 C14orf178Q8N769 122 aaPredicted RBP18.91■□□□□ 0.62
SCARF1-207ENST00000573867 C19orf71A6NCJ1 209 aa18.9■□□□□ 0.62
SCARF1-207ENST00000573867 SNAI2O43623 268 aa18.9■□□□□ 0.62
SCARF1-207ENST00000573867 TAGLN2P37802 199 aaKnown RBP18.9■□□□□ 0.62
SCARF1-207ENST00000573867 SSBP4Q9BWG4 385 aaPredicted RBP18.9■□□□□ 0.62
SCARF1-207ENST00000573867 LINC00694P0DN24 101 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms