RNA–Protein interactions for RNA: ENST00000573550.5

CDC27-215, Transcript of cell division cycle 27, humanhuman

TSL 3

Gene CDC27, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-215ENST00000573550 TYMSOSQ8TAI1 123 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 PRELID3AQ96N28 172 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 HIGD1BQ9P298 99 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 ONECUT1Q9UBC0 465 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 SMPXQ9UHP9 88 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 LENEPQ9Y5L5 61 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 CELSR3Q9NYQ7 3312 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 MUC6Q6W4X9 2439 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 ROS1P08922 2347 aa3.54□□□□□ -1.84
CDC27-215ENST00000573550 PTPRZ1P23471 2315 aaPredicted RBP3.54□□□□□ -1.84
CDC27-215ENST00000573550 TRBV7-9A0A0J9YWB2 115 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 LINC01549A6NIU2 74 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 D6R8Y8 96 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 TCF21O43680 179 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 KRTAP1-4P0C5Y4 121 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 CRIP1P50238 77 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 ARF6P62330 175 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 RBX1P62877 108 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 LDLRAD2Q5SZI1 272 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 LINC00173Q6ZV60 143 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 C2orf91Q6ZV80 131 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 VMO1Q7Z5L0 202 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 OR4C5Q8NGB2 326 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 MAP1LC3AQ9H492 121 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 SIGLEC8Q9NYZ4 499 aa3.53□□□□□ -1.84
CDC27-215ENST00000573550 SPENQ96T58 3664 aaKnown RBP3.53□□□□□ -1.84
CDC27-215ENST00000573550 AKAP13Q12802 2813 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 RIF1Q5UIP0 2472 aaKnown RBP3.52□□□□□ -1.85
CDC27-215ENST00000573550 SPTA1P02549 2419 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 LOC400499M0QZD8 3231 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 TPRP12270 2363 aaKnown RBP3.52□□□□□ -1.85
CDC27-215ENST00000573550 PTPRQQ9UMZ3 2332 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 TRBV7-1A0A0A6YYK4 115 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 IGHV7-81A0A0B4J1V7 117 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 MUC21A0A0G2JKD1 596 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 MUC21A0A140T8X8 626 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 FABP5P3A8MUU1 101 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 LINC01619G3V211 115 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 H3BRM9 83 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 H3BTX0 84 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 K7ERU9 68 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 M0R3E3 92 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 ATP5LO75964 103 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 GOSR1O95249 250 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 CTSGP08311 255 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 SLC25A16P16260 332 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 CACNG7P62955 275 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 NDPQ00604 133 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 MRPL51Q4U2R6 128 aaKnown RBP3.52□□□□□ -1.85
CDC27-215ENST00000573550 TMEM97Q5BJF2 176 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 MUC21Q5SSG8 566 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 KRTAP5-1Q6L8H4 278 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 LYZL1Q6UWQ5 148 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 GTF2H5Q6ZYL4 71 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 OR5A1Q8NGJ0 315 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 ZNF502Q8TBZ5 544 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 IFI27L1Q96BM0 104 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 SIRPDQ9H106 197 aa3.52□□□□□ -1.85
CDC27-215ENST00000573550 IGHV3-21A0A0B4J1V1 117 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 A0A1W2PRD5 423 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 A0A1W2PRF3 423 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 A0A1W2PRM7 423 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 RPL37AP8A6NKH3 93 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 FAM223BA6NKX1 122 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 H3BUA1 57 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 SNAI2O43623 268 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 NPYP01303 97 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 IGHG4P01861 327 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 APELAP0DMC3 54 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 EVI2AP22794 236 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 PLNP26678 52 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 FCER1GP30273 86 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 CKS2P33552 79 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 IFI27P40305 119 aaPredicted RBP3.51□□□□□ -1.85
CDC27-215ENST00000573550 UBE2E1P51965 193 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 KLRB1Q12918 225 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 VAMP3Q15836 100 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 TAL2Q16559 108 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 KLF17Q5JT82 389 aaPredicted RBP3.51□□□□□ -1.85
CDC27-215ENST00000573550 SAMD13Q5VXD3 122 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 UFSP1Q6NVU6 142 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 ADAMTSL5Q6ZMM2 481 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 SMIM15Q7Z3B0 74 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 FAM223AQ8IWN6 122 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 AMN1Q8IY45 258 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 Q8N8P6 123 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 Q8N9W7 124 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 MRAP2Q96G30 205 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 PCNX1Q96RV3 2341 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 ZFHX4Q86UP3 3567 aa3.51□□□□□ -1.85
CDC27-215ENST00000573550 ABCA1O95477 2261 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 IGLV2-18A0A075B6J9 118 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 IGKV2-40A0A087WW87 121 aaPredicted RBP3.5□□□□□ -1.85
CDC27-215ENST00000573550 TRAV12-1A0A0B4J245 112 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 CENPVL3A0A0U1RRI6 287 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 TMEM213A2RRL7 107 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 OR2T8A6NH00 312 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 K7EP34 96 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 M0R381 172 aa3.5□□□□□ -1.85
CDC27-215ENST00000573550 PPP1R17O96001 155 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms