RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 TENM2Q9NT68 2774 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 TMSB15BA0A087X1C1 80 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 TRAV4A0A0B4J268 109 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 H3BNG1 76 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 CIDEAO60543 219 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 RPL19P84098 196 aaKnown RBP12.1□□□□□ -0.47
LITAF-212ENST00000573332 SLAQ13239 276 aa12.1□□□□□ -0.47
LITAF-212ENST00000573332 H3BVH4 76 aa12.09□□□□□ -0.47
LITAF-212ENST00000573332 SRSF3P84103 164 aaKnown RBP12.09□□□□□ -0.47
LITAF-212ENST00000573332 FHL2Q14192 279 aa12.09□□□□□ -0.47
LITAF-212ENST00000573332 LGALS9CQ6DKI2 356 aa12.09□□□□□ -0.47
LITAF-212ENST00000573332 LINC00476Q8WZB0 136 aa12.09□□□□□ -0.47
LITAF-212ENST00000573332 SMIM7Q9BQ49 75 aa12.09□□□□□ -0.47
LITAF-212ENST00000573332 SSBP4Q9BWG4 385 aaPredicted RBP12.09□□□□□ -0.47
LITAF-212ENST00000573332 C9JQL5 133 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 K7EN84 100 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 RS1O15537 224 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 CEBPGP53567 150 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 RPS20P60866 119 aaKnown RBP12.08□□□□□ -0.48
LITAF-212ENST00000573332 FAM74A3Q4VXF1 159 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 OR4C5Q8NGB2 326 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 ZNF479Q96JC4 524 aa12.08□□□□□ -0.48
LITAF-212ENST00000573332 TRAV26-1A0A087WT03 109 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 ZNF727A8MUV8 499 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 SNAI2O43623 268 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 P01737 135 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 IGHV3-53P01767 116 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 OR5AL1P0C617 328 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 CFAP126Q5VTH2 177 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 SYT8Q8NBV8 401 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 NUDT10Q8NFP7 164 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 NUDT11Q96G61 164 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 PRO0255Q9UI72 69 aa12.07□□□□□ -0.48
LITAF-212ENST00000573332 KMT2CQ8NEZ4 4911 aaKnown RBP12.06□□□□□ -0.48
LITAF-212ENST00000573332 A8MWV9 139 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 SFTA3P0C7M3 94 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 DMRTA1Q5VZB9 504 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 FAM231DQ6ZW35 169 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 OR2D3Q8NGH3 330 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 VSIG2Q96IQ7 327 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 HHLA3Q9XRX5 114 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 PHLDA3Q9Y5J5 127 aa12.06□□□□□ -0.48
LITAF-212ENST00000573332 XKRY2A2RUG3 117 aa12.05□□□□□ -0.48
LITAF-212ENST00000573332 CRYBA4P53673 196 aa12.05□□□□□ -0.48
LITAF-212ENST00000573332 LINC01551Q86U37 167 aa12.05□□□□□ -0.48
LITAF-212ENST00000573332 ZFP82Q8N141 532 aa12.05□□□□□ -0.48
LITAF-212ENST00000573332 TRGV4A0A0C4DH28 118 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 NXPH4O95158 308 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 IGLC6P0CF74 106 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 P0DMU3 169 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 FAM231AP0DMU4 169 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 FAM231CP0DMU5 169 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 ZFP2Q6ZN57 461 aa12.04□□□□□ -0.48
LITAF-212ENST00000573332 MUC4Q99102 2169 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 A0A0J9YY99 117 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 PAX4O43316 350 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 LY6G6CO95867 125 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 TMEM241Q24JQ0 296 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 SFRP2Q96HF1 295 aa12.03□□□□□ -0.48
LITAF-212ENST00000573332 RNASE7Q9H1E1 156 aaKnown RBP12.03□□□□□ -0.48
LITAF-212ENST00000573332 RPP21Q9H633 154 aaKnown RBP12.03□□□□□ -0.48
LITAF-212ENST00000573332 NUDT3O95989 172 aa12.02□□□□□ -0.49
LITAF-212ENST00000573332 GATA1P15976 413 aaPredicted RBP12.02□□□□□ -0.49
LITAF-212ENST00000573332 SOHLH1Q5JUK2 328 aa12.02□□□□□ -0.49
LITAF-212ENST00000573332 UFSP1Q6NVU6 142 aa12.02□□□□□ -0.49
LITAF-212ENST00000573332 FER1L6-AS1Q8NA97 138 aa12.02□□□□□ -0.49
LITAF-212ENST00000573332 OR10AG1Q8NH19 301 aa12.02□□□□□ -0.49
LITAF-212ENST00000573332 ALMS1Q8TCU4 4167 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 TRBV6-4A0A1B0GX49 114 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 A0A1W2PPQ1 181 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 F2Z2F3 143 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 M0R381 172 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 GZMBP10144 247 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 RNF212Q495C1 297 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 NAT8Q9UHE5 227 aa12.01□□□□□ -0.49
LITAF-212ENST00000573332 DNAH1Q9P2D7 4330 aa12□□□□□ -0.49
LITAF-212ENST00000573332 SACSQ9NZJ4 4579 aa12□□□□□ -0.49
LITAF-212ENST00000573332 A0A096LPF7 62 aa12□□□□□ -0.49
LITAF-212ENST00000573332 RHODO00212 210 aa12□□□□□ -0.49
LITAF-212ENST00000573332 GATCO43716 136 aaKnown RBP12□□□□□ -0.49
LITAF-212ENST00000573332 ERVFC1-1P60608 527 aa12□□□□□ -0.49
LITAF-212ENST00000573332 RPL23P62829 140 aaKnown RBP12□□□□□ -0.49
LITAF-212ENST00000573332 CT83Q5H943 113 aa12□□□□□ -0.49
LITAF-212ENST00000573332 LYSTQ99698 3801 aa12□□□□□ -0.49
LITAF-212ENST00000573332 JPT2Q9H910 190 aa12□□□□□ -0.49
LITAF-212ENST00000573332 OSTCQ9NRP0 149 aa12□□□□□ -0.49
LITAF-212ENST00000573332 CRYGDP07320 174 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 SPANXN1Q5VSR9 72 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 WDR73Q6P4I2 378 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 ISOC2Q96AB3 205 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 SAMD10Q9BYL1 202 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 ICOSQ9Y6W8 199 aa11.99□□□□□ -0.49
LITAF-212ENST00000573332 A8MWL6 223 aa11.98□□□□□ -0.49
LITAF-212ENST00000573332 FAM3BP58499 235 aaPredicted RBP11.98□□□□□ -0.49
LITAF-212ENST00000573332 CACNG7P62955 275 aa11.98□□□□□ -0.49
LITAF-212ENST00000573332 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
LITAF-212ENST00000573332 SLC25A29Q8N8R3 303 aa11.98□□□□□ -0.49
LITAF-212ENST00000573332 CTRLP40313 264 aa11.97□□□□□ -0.49
LITAF-212ENST00000573332 FOXA3P55318 350 aaPredicted RBP11.97□□□□□ -0.49
LITAF-212ENST00000573332 RHOHQ15669 191 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms