RNA–Protein interactions for RNA: ENST00000573153.5

SMG6-212, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-212ENST00000573153 GYPEP15421 78 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 SRIP30626 198 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 DNLZQ5SXM8 178 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 CFAP126Q5VTH2 177 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 KRTAP4-5Q9BYR2 181 aa11.8□□□□□ -0.52
SMG6-212ENST00000573153 TIRAPP58753 221 aa11.79□□□□□ -0.52
SMG6-212ENST00000573153 LINC00315P59091 139 aa11.79□□□□□ -0.52
SMG6-212ENST00000573153 LGALSLQ3ZCW2 172 aaPredicted RBP11.79□□□□□ -0.52
SMG6-212ENST00000573153 TMUB2Q71RG4 321 aa11.79□□□□□ -0.52
SMG6-212ENST00000573153 SH2D6Q7Z4S9 175 aa11.79□□□□□ -0.52
SMG6-212ENST00000573153 PCNPQ8WW12 178 aaKnown RBP11.79□□□□□ -0.52
SMG6-212ENST00000573153 TXNDC17Q9BRA2 123 aa11.79□□□□□ -0.52
SMG6-212ENST00000573153 LOC100131303A0A0U1RQF7 123 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 LTAP01374 205 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 CRIP1P50238 77 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 KRTAP10-2P60368 255 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 ZNF506Q5JVG8 444 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 TCTE3Q8IZS6 198 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 FAM213BQ8TBF2 198 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 SFT2D1Q8WV19 159 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 ZC2HC1AQ96GY0 325 aa11.78□□□□□ -0.52
SMG6-212ENST00000573153 TRBV6-4A0A1B0GX49 114 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 PGPEP1LA6NFU8 196 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 K7EP13 123 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 PAGE4O60829 102 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 TPT1P13693 172 aaKnown RBP11.77□□□□□ -0.53
SMG6-212ENST00000573153 UBE2G1P62253 170 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 ZNF674Q2M3X9 581 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 CST9LP1Q5W188 147 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 IL36BQ9NZH7 164 aa11.77□□□□□ -0.53
SMG6-212ENST00000573153 PFDN1O60925 122 aa11.76□□□□□ -0.53
SMG6-212ENST00000573153 S100A9P06702 114 aaKnown RBP11.76□□□□□ -0.53
SMG6-212ENST00000573153 ASIPP42127 132 aa11.76□□□□□ -0.53
SMG6-212ENST00000573153 FAM162BQ5T6X4 162 aa11.76□□□□□ -0.53
SMG6-212ENST00000573153 WFDC10BQ8IUB3 73 aa11.76□□□□□ -0.53
SMG6-212ENST00000573153 TNFRSF18Q9Y5U5 241 aa11.76□□□□□ -0.53
SMG6-212ENST00000573153 B4DEV8 164 aa11.75□□□□□ -0.53
SMG6-212ENST00000573153 KRBOX1C9JBD0 128 aa11.75□□□□□ -0.53
SMG6-212ENST00000573153 H2AFB1P0C5Y9 115 aa11.75□□□□□ -0.53
SMG6-212ENST00000573153 ZFP2Q6ZN57 461 aa11.75□□□□□ -0.53
SMG6-212ENST00000573153 SLC25A29Q8N8R3 303 aa11.75□□□□□ -0.53
SMG6-212ENST00000573153 TRAV1-1A0A0B4J248 108 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 A8MWV9 139 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 C16orf90A8MZG2 172 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 SH2D1AO60880 128 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 MGST1P10620 155 aaKnown RBP11.74□□□□□ -0.53
SMG6-212ENST00000573153 S100A4P26447 101 aaKnown RBP11.74□□□□□ -0.53
SMG6-212ENST00000573153 AKR1C3P42330 323 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 RAB5CP51148 216 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 RHOHQ15669 191 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 LINC01559Q495D7 138 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 Q6ZNX1 250 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 SPATA12Q7Z6I5 190 aa11.74□□□□□ -0.53
SMG6-212ENST00000573153 DNAH10OSP0CZ25 163 aa11.73□□□□□ -0.53
SMG6-212ENST00000573153 UFSP1Q6NVU6 142 aa11.73□□□□□ -0.53
SMG6-212ENST00000573153 PRADC1Q9BSG0 188 aa11.73□□□□□ -0.53
SMG6-212ENST00000573153 SCRT2Q9NQ03 307 aa11.73□□□□□ -0.53
SMG6-212ENST00000573153 CDK2AP2O75956 126 aa11.72□□□□□ -0.53
SMG6-212ENST00000573153 EIF5AL1Q6IS14 154 aaKnown RBP11.72□□□□□ -0.53
SMG6-212ENST00000573153 MLST8Q9BVC4 326 aa11.72□□□□□ -0.53
SMG6-212ENST00000573153 PARLQ9H300 379 aa11.72□□□□□ -0.53
SMG6-212ENST00000573153 LY96Q9Y6Y9 160 aa11.72□□□□□ -0.53
SMG6-212ENST00000573153 TRAV9-2A0A087WT02 112 aa11.71□□□□□ -0.53
SMG6-212ENST00000573153 SCO2A0A1W2PP80 73 aa11.71□□□□□ -0.53
SMG6-212ENST00000573153 C1QBP02746 253 aa11.71□□□□□ -0.53
SMG6-212ENST00000573153 MANBALQ9NQG1 85 aa11.71□□□□□ -0.53
SMG6-212ENST00000573153 BOLA1Q9Y3E2 137 aa11.71□□□□□ -0.53
SMG6-212ENST00000573153 H3BVH4 76 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 CXCL1P09341 107 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 ARMS2P0C7Q2 107 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 LINC00694P0DN24 101 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 Q6ZSN1 163 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 NHLRC2Q8NBF2 726 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 C11orf52Q96A22 123 aa11.7□□□□□ -0.54
SMG6-212ENST00000573153 DNAH8Q96JB1 4490 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 IGHV3-73A0A0B4J1V6 119 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 A0A1B0GV50 99 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 M0R036 132 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 SULT1A2P50226 295 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 DMRTA1Q5VZB9 504 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 NFE4Q86UQ8 179 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 SYT8Q8NBV8 401 aa11.69□□□□□ -0.54
SMG6-212ENST00000573153 RHODO00212 210 aa11.68□□□□□ -0.54
SMG6-212ENST00000573153 EVI2AP22794 236 aa11.68□□□□□ -0.54
SMG6-212ENST00000573153 CCL20P78556 96 aa11.68□□□□□ -0.54
SMG6-212ENST00000573153 SLC51BQ86UW2 128 aa11.68□□□□□ -0.54
SMG6-212ENST00000573153 C10orf126Q8N4M7 172 aa11.68□□□□□ -0.54
SMG6-212ENST00000573153 FAT1Q14517 4588 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 GRIFINA4D1Z8 144 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 BAGE2Q86Y30 109 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 SFRP2Q96HF1 295 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 JPT2Q9H910 190 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 Q9UF83 564 aa11.67□□□□□ -0.54
SMG6-212ENST00000573153 TEX46H3BTG2 121 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 FUSP35637 526 aaKnown RBP eCLIP11.66□□□□□ -0.54
SMG6-212ENST00000573153 LINC01556Q5JQF7 62 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 LELP1Q5T871 98 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 SAMD10Q9BYL1 202 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 GTSF1LQ9H1H1 148 aa11.66□□□□□ -0.54
SMG6-212ENST00000573153 MSRB1Q9NZV6 116 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms