RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 K7EQM0 130 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 MPC2O95563 127 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 OXTP01178 125 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 GCGP01275 180 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 TCRAP04437 139 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 PET100P0DJ07 73 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 RNASE3P12724 160 aaKnown RBP6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 RPL12P30050 165 aaKnown RBP6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 KRTAP10-4P60372 401 aaPredicted RBP6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 GAGE1Q13065 139 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 GAGE4Q13068 117 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 GAGE5Q13069 117 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 LINC01620Q4KN68 170 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 GAGE13Q4V321 117 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 Q8N976 141 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 TMEM75Q8N9X5 138 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 C5orf17Q8NAS9 161 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 ENKURQ8TC29 256 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 RMI2Q96E14 147 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 CHAC1Q9BUX1 264 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 PSG8Q9UQ74 426 aa6.48□□□□□ -1.37
TRAPPC1-205ENST00000572656 RNF222A6NCQ9 220 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 A8MWV9 139 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 HMGB3O15347 200 aaKnown RBP6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 FGF8P55075 233 aaPredicted RBP6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 RAB2AP61019 212 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 ZFP69Q49AA0 526 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 SMUG1Q53HV7 270 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 CYB561D1Q8N8Q1 229 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 OR10G9Q8NGN4 311 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 OR10G7Q8NGN6 311 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 CIRBP-AS1Q8TBR5 109 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 LINC00479Q96M42 142 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 PARLQ9H300 379 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 WFDC1Q9HC57 220 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 NDUFA13Q9P0J0 144 aa6.47□□□□□ -1.37
TRAPPC1-205ENST00000572656 INMT-MINDY4F8WBC2 141 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 IGLV2-11P01706 119 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 SEC11BP0C7V7 166 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 ARL14EPLP0DKL9 152 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 FLI1Q01543 452 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 LGALSLQ3ZCW2 172 aaPredicted RBP6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 SAPCD1Q5SSQ6 148 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 UFSP1Q6NVU6 142 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 LINC00299Q6ZSB3 139 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 OR2T35Q8NGX2 323 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 SUN5Q8TC36 379 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 Q9UF83 564 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 URGCP-MRPS24S4R325 110 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 HMCN2Q8NDA2 5059 aa6.46□□□□□ -1.38
TRAPPC1-205ENST00000572656 IGKV2D-24A0A075B6R9 120 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 STAG3L2P0CL84 134 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 STAG3L3P0CL85 134 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 S100A4P26447 101 aaKnown RBP6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 CDC34P49427 236 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 PRNTQ86SH4 94 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 NIT1Q86X76 327 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 C14orf178Q8N769 122 aaPredicted RBP6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 S100ZQ8WXG8 99 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 SAMD10Q9BYL1 202 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 EPDR1Q9UM22 224 aa6.45□□□□□ -1.38
TRAPPC1-205ENST00000572656 IGKV3D-20A0A0C4DH25 116 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 SSNA1O43805 119 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 IGLV2-8P01709 118 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 GCHFRP30047 84 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 ASIPP42127 132 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 SUMO1P63165 101 aaKnown RBP6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 RAB24Q969Q5 203 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 DNAJC30Q96LL9 226 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 JPT2Q9H910 190 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 KLK12Q9UKR0 248 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 PLA2G2DQ9UNK4 145 aa6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 LRP1Q07954 4544 aaKnown RBP6.44□□□□□ -1.38
TRAPPC1-205ENST00000572656 FABP5P3A8MUU1 101 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 RHODO00212 210 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 UPK1BO75841 260 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 ELOBQ15370 118 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 OR2G3Q8NGZ4 309 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 UBE2WQ96B02 151 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 MARVELD1Q9BSK0 173 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 CHCHD7Q9BUK0 85 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 TMEM167BQ9NRX6 74 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 IL36BQ9NZH7 164 aa6.43□□□□□ -1.38
TRAPPC1-205ENST00000572656 A0A087WX48 190 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 MBP02144 154 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 IFITM3Q01628 133 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 DMRTA1Q5VZB9 504 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 KCNIP4Q6PIL6 250 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 ATRAIDQ6UW56 229 aa6.42□□□□□ -1.38
TRAPPC1-205ENST00000572656 TRAV34A0A0B4J273 112 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 B4DEV8 164 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 H3BVH4 76 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 CXorf1O96002 111 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 Q0VG73 95 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 C14orf177Q52M58 125 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 DNLZQ5SXM8 178 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 HSD17B11Q8NBQ5 300 aa6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 PSMG3Q9BT73 122 aaPredicted RBP6.41□□□□□ -1.38
TRAPPC1-205ENST00000572656 ARL2-SNX15V9GYD0 113 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms