RNA–Protein interactions for RNA: ENST00000571249.1

CHD3-213, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-213ENST00000571249 CEBPGP53567 150 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 ELOBQ15370 118 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 MORN5Q5VZ52 161 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 ZNF705AQ6ZN79 300 aaPredicted RBP4.71□□□□□ -1.66
CHD3-213ENST00000571249 LINC01551Q86U37 167 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 IMMP2LQ96T52 175 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 THYN1Q9P016 225 aa4.71□□□□□ -1.66
CHD3-213ENST00000571249 TRBV20OR9-2A0A075B6H5 130 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 TRAV5A0A0B4J249 113 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 A0A0U1RQV1 116 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 SCO2A0A1W2PP80 73 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 F5H768 121 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 PPP1R2P9O14990 202 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 OR7C2O60412 319 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 IGHV3-48P01763 117 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 PSG1P11464 419 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 TAS2R60P59551 318 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 UBE2G2P60604 165 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 TIGITQ495A1 244 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 LINC00305Q7Z4B0 112 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 ISOC2Q96AB3 205 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 ZNF414Q96IQ9 312 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 SGK494Q96LW2 274 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 PAXXQ9BUH6 204 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 MLST8Q9BVC4 326 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 C1QTNF4Q9BXJ3 329 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 OR51M1Q9H341 326 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 RABAC1Q9UI14 185 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 HIGD1AQ9Y241 93 aa4.7□□□□□ -1.66
CHD3-213ENST00000571249 TRAV2A0A0B4J234 112 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 ZNF705FA8MVS1 300 aaPredicted RBP4.69□□□□□ -1.66
CHD3-213ENST00000571249 C1orf196B1AJZ1 125 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 GGTLC3B5MD39 225 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 H3BRN7 92 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 TYMSP04818 313 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 OR10J4P0C629 311 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 ZNF688P0C7X2 276 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 ZNF705DP0CH99 300 aaPredicted RBP4.69□□□□□ -1.66
CHD3-213ENST00000571249 ZNF705BP0CI00 300 aaPredicted RBP4.69□□□□□ -1.66
CHD3-213ENST00000571249 RD3LP0DJH9 198 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 UBE2L3P68036 154 aaKnown RBP4.69□□□□□ -1.66
CHD3-213ENST00000571249 ADIRFQ15847 76 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 S100A7AQ86SG5 101 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 Q8WTZ3 238 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 SMIM12Q96EX1 92 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 BTF3L4Q96K17 158 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 UPK3BQ9BT76 320 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 SHANK2-AS3Q9BTD1 123 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 SLC25A39Q9BZJ4 359 aaPredicted RBP4.69□□□□□ -1.66
CHD3-213ENST00000571249 C21orf62Q9NYP8 219 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 RNF24Q9Y225 148 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 KLF12Q9Y4X4 402 aa4.69□□□□□ -1.66
CHD3-213ENST00000571249 TRAV9-1A0A075B6T8 112 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 IGHV3-21A0A0B4J1V1 117 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 IGHV3-66A0A0C4DH42 116 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 TRBV6-1A0A0K0K1D8 114 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 hDV102S1A0JD36 115 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 H7BYZ3 331 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 PHOX2AO14813 284 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 MRPS12O15235 138 aaKnown RBP4.68□□□□□ -1.66
CHD3-213ENST00000571249 GCGP01275 180 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 IGLV2-8P01709 118 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 CTSGP08311 255 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 CXCL1P09341 107 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 NBEAP1P0C6P0 100 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 PYYP10082 97 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 HIST1H1EP10412 219 aaKnown RBP4.68□□□□□ -1.66
CHD3-213ENST00000571249 ORM2P19652 201 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 CRYBB3P26998 211 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 RPL35P42766 123 aaKnown RBP4.68□□□□□ -1.66
CHD3-213ENST00000571249 RAB5BP61020 215 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 NUTF2P61970 127 aaKnown RBP4.68□□□□□ -1.66
CHD3-213ENST00000571249 FOXI1Q12951 378 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 PAPPA-AS1Q5QFB9 102 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 ZNF600Q6ZNG1 722 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 OR1B1Q8NGR6 318 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 MRPL53Q96EL3 112 aaKnown RBP4.68□□□□□ -1.66
CHD3-213ENST00000571249 IGF2BP2-AS1Q96M15 143 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 DERL1Q9BUN8 251 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 OSTCQ9NRP0 149 aa4.68□□□□□ -1.66
CHD3-213ENST00000571249 TGIF2-C20orf24A0A0A6YYL0 155 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.67□□□□□ -1.66
CHD3-213ENST00000571249 K7EN84 100 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 K7EQG2 157 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 GNG7O60262 68 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 APOHP02749 345 aaPredicted RBP4.67□□□□□ -1.66
CHD3-213ENST00000571249 IGLC2P0DOY2 106 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 DEFB130BP0DP73 79 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 DEFB130AP0DP74 79 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 S100A7P31151 101 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 LYZP61626 148 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 PDE6HQ13956 83 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 ESRGQ1W209 222 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 FAM231DQ6ZW35 169 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 BPIFA4PQ86YQ2 179 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 C5orf17Q8NAS9 161 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 SFRP2Q96HF1 295 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 BIN3Q9NQY0 253 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 OTORQ9NRC9 128 aa4.67□□□□□ -1.66
CHD3-213ENST00000571249 EPDR1Q9UM22 224 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms