RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 Q9UF83 564 aa11.65□□□□□ -0.54
CIITA-206ENST00000571190 GGTLC3B5MD39 225 aa11.64□□□□□ -0.55
CIITA-206ENST00000571190 LINC00694P0DN24 101 aa11.64□□□□□ -0.55
CIITA-206ENST00000571190 MGST1P10620 155 aaKnown RBP11.64□□□□□ -0.55
CIITA-206ENST00000571190 GCHFRP30047 84 aa11.64□□□□□ -0.55
CIITA-206ENST00000571190 SUMO1P63165 101 aaKnown RBP11.64□□□□□ -0.55
CIITA-206ENST00000571190 EPDR1Q9UM22 224 aa11.64□□□□□ -0.55
CIITA-206ENST00000571190 BOLA1Q9Y3E2 137 aa11.64□□□□□ -0.55
CIITA-206ENST00000571190 SRRM2Q9UQ35 2752 aaKnown RBP11.64□□□□□ -0.55
CIITA-206ENST00000571190 A6NHS1 94 aa11.63□□□□□ -0.55
CIITA-206ENST00000571190 FLI1Q01543 452 aaPredicted RBP11.63□□□□□ -0.55
CIITA-206ENST00000571190 LAGE3Q14657 143 aa11.63□□□□□ -0.55
CIITA-206ENST00000571190 HSD17B11Q8NBQ5 300 aa11.63□□□□□ -0.55
CIITA-206ENST00000571190 FLG2Q5D862 2391 aaPredicted RBP11.63□□□□□ -0.55
CIITA-206ENST00000571190 IGKV3D-20A0A0C4DH25 116 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 C1QBP02746 253 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 SMUG1Q53HV7 270 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 Q6ZSA8 131 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 PRNTQ86SH4 94 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 PARLQ9H300 379 aa11.62□□□□□ -0.55
CIITA-206ENST00000571190 ATP6V0CP27449 155 aa11.61□□□□□ -0.55
CIITA-206ENST00000571190 UFSP1Q6NVU6 142 aa11.61□□□□□ -0.55
CIITA-206ENST00000571190 LINC00479Q96M42 142 aa11.61□□□□□ -0.55
CIITA-206ENST00000571190 PSMG3Q9BT73 122 aaPredicted RBP11.61□□□□□ -0.55
CIITA-206ENST00000571190 GAGE12JA6NER3 117 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 K7EQM0 130 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 GAGE1Q13065 139 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 GAGE4Q13068 117 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 GAGE5Q13069 117 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 GAGE13Q4V321 117 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 ZFP2Q6ZN57 461 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 DAZ4Q86SG3 579 aaKnown RBP11.6□□□□□ -0.55
CIITA-206ENST00000571190 CYB561D1Q8N8Q1 229 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 TM2D2Q9BX73 214 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 SH3BGRL3Q9H299 93 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 JPT2Q9H910 190 aa11.6□□□□□ -0.55
CIITA-206ENST00000571190 DAZ3Q9NR90 486 aaKnown RBP11.6□□□□□ -0.55
CIITA-206ENST00000571190 TRAV34A0A0B4J273 112 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 LECT2O14960 151 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 DEFA1P59665 94 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 DEFA3P59666 94 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 AQP10Q96PS8 301 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 SAMD10Q9BYL1 202 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
CIITA-206ENST00000571190 SERF2P84101 59 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 ZFP69Q49AA0 526 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 Q5BKY6 102 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 PIK3CD-AS1Q5SR53 167 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 SAPCD1Q5SSQ6 148 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 OR2T35Q8NGX2 323 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 TMEM167BQ9NRX6 74 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 ALG5Q9Y673 324 aa11.58□□□□□ -0.56
CIITA-206ENST00000571190 A8MWV9 139 aa11.57□□□□□ -0.56
CIITA-206ENST00000571190 CXorf1O96002 111 aa11.57□□□□□ -0.56
CIITA-206ENST00000571190 C14orf178Q8N769 122 aaPredicted RBP11.57□□□□□ -0.56
CIITA-206ENST00000571190 TNFSF18Q9UNG2 199 aa11.57□□□□□ -0.56
CIITA-206ENST00000571190 ARL2-SNX15V9GYD0 113 aa11.57□□□□□ -0.56
CIITA-206ENST00000571190 TRAV8-3A0A0A6YYJ7 113 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 A0A1W2PRE2 83 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 MBP02144 154 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 CRIP1P50238 77 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 ZNF726P1Q15940 193 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 LGALSLQ3ZCW2 172 aaPredicted RBP11.56□□□□□ -0.56
CIITA-206ENST00000571190 DNAJC30Q96LL9 226 aa11.56□□□□□ -0.56
CIITA-206ENST00000571190 ACTR3CQ9C0K3 210 aaPredicted RBP11.56□□□□□ -0.56
CIITA-206ENST00000571190 FABP5P3A8MUU1 101 aa11.55□□□□□ -0.56
CIITA-206ENST00000571190 S100A4P26447 101 aaKnown RBP11.55□□□□□ -0.56
CIITA-206ENST00000571190 LINC01620Q4KN68 170 aa11.55□□□□□ -0.56
CIITA-206ENST00000571190 DMRTA1Q5VZB9 504 aa11.55□□□□□ -0.56
CIITA-206ENST00000571190 BAALCQ8WXS3 180 aa11.55□□□□□ -0.56
CIITA-206ENST00000571190 IL36BQ9NZH7 164 aa11.55□□□□□ -0.56
CIITA-206ENST00000571190 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.54□□□□□ -0.56
CIITA-206ENST00000571190 J3QL48 77 aa11.54□□□□□ -0.56
CIITA-206ENST00000571190 ASIPP42127 132 aa11.54□□□□□ -0.56
CIITA-206ENST00000571190 LINC00528Q8N1L1 170 aa11.54□□□□□ -0.56
CIITA-206ENST00000571190 A0A087WWC5 75 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 RNF222A6NCQ9 220 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 KRBOX1C9JBD0 128 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 H3BVH4 76 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 PLA2G1BP04054 148 aaKnown RBP11.52□□□□□ -0.57
CIITA-206ENST00000571190 FGF8P55075 233 aaPredicted RBP11.52□□□□□ -0.57
CIITA-206ENST00000571190 DNLZQ5SXM8 178 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 RPL7L1Q6DKI1 246 aaKnown RBP11.52□□□□□ -0.57
CIITA-206ENST00000571190 Q86TA4 180 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 NIT1Q86X76 327 aa11.52□□□□□ -0.57
CIITA-206ENST00000571190 KRTAP29-1A8MX34 341 aaPredicted RBP11.51□□□□□ -0.57
CIITA-206ENST00000571190 B4DEV8 164 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 PEX7O00628 323 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 IFNA7P01567 189 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 ARMS2P0C7Q2 107 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 KRTAP10-4P60372 401 aaPredicted RBP11.51□□□□□ -0.57
CIITA-206ENST00000571190 UBE2G2P60604 165 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 TOR2AQ5JU69 321 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 SCXQ7RTU7 201 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 COX8CQ7Z4L0 72 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 ZC2HC1AQ96GY0 325 aa11.51□□□□□ -0.57
CIITA-206ENST00000571190 GRIFINA4D1Z8 144 aa11.5□□□□□ -0.57
CIITA-206ENST00000571190 FAM74A7A6NL05 159 aa11.5□□□□□ -0.57
CIITA-206ENST00000571190 M0R036 132 aa11.5□□□□□ -0.57
CIITA-206ENST00000571190 COX11Q9Y6N1 276 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 105.4 ms