RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 IGLV8-61A0A075B6I0 122 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 TRBV19A0A075B6N1 114 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 TRAV8-2A0A0B4J237 113 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 SERTM2A0A1B0GWG4 89 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 LINC00862A6NCI5 91 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705EA8MWA4 302 aaPredicted RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 C11orf94C9JXX5 98 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 TAAR5O14804 337 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 OR7C2O60412 319 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 NDUFS6O75380 124 aaKnown RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 INSP01308 110 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 HBE1P02100 147 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 NBEAP1P0C6P0 100 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 SPART-AS1P0CW21 52 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 IGLC2P0DOY2 106 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 CDKN1BP46527 198 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 CEBPGP53567 150 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 TCTAP57738 103 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 SERF2P84101 59 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 HIST1H1AQ02539 215 aaPredicted RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 KHDC3LQ587J8 217 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 FAM74A1Q5RGS3 127 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 DNLZQ5SXM8 178 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 ZFAND6Q6FIF0 208 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 LYPD1Q8N2G4 141 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 RNF182Q8N6D2 247 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 OR8A1Q8NGG7 326 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 OR2T35Q8NGX2 323 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 RNASE8Q8TDE3 154 aaKnown RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 RXFP4Q8TDU9 374 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 BLNKQ8WV28 456 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 GNPNAT1Q96EK6 184 aaPredicted RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 IGF2BP2-AS1Q96M15 143 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 AQP10Q96PS8 301 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 C20orf144Q9BQM9 153 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 SMIM3Q9BZL3 60 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 ZNF331Q9NQX6 463 aaPredicted RBP2.65□□□□□ -1.99
NUP88-202ENST00000570937 RFNGQ9Y644 331 aa2.65□□□□□ -1.99
NUP88-202ENST00000570937 TENM3Q9P273 2699 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 FXYD6-FXYD2A0A087WZ82 144 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 TRAV5A0A0B4J249 113 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705FA8MVS1 300 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 F6UB75 175 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 H3BQ15 152 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 H7BYZ3 331 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 K7EQM0 130 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 MRPS12O15235 138 aaKnown RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 ARPC5O15511 151 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 SERF1AO75920 110 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 NMBP08949 121 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705DP0CH99 300 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705BP0CI00 300 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 LEPP41159 167 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 EMP1P54849 157 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 FXYD7P58549 80 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 RANP62826 216 aaKnown RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 EIF5AP63241 154 aaKnown RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 UBE2L3P68036 154 aaKnown RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 RRN3P1Q2M238 152 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 GCSAMLQ5JQS6 135 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 TMEM78Q5T7P6 136 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 GDF5OSQ5U4N7 250 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 CEMP1Q6PRD7 247 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 ZNF705AQ6ZN79 300 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 MIR17HGQ75NE6 70 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 SMIM15Q7Z3B0 74 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 CEND1Q8N111 149 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 Q8NAQ8 132 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 OR10G4Q8NGN3 311 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 OR10G9Q8NGN4 311 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 OR2G3Q8NGZ4 309 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 CMTM2Q8TAZ6 248 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 ODF3Q96PU9 254 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 LINC01587Q99440 93 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 NIPSNAP3BQ9BS92 247 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 C2orf88Q9BSF0 95 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 PSMG3Q9BT73 122 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 SLC25A2Q9BXI2 301 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 ACTR3CQ9C0K3 210 aaPredicted RBP2.64□□□□□ -1.99
NUP88-202ENST00000570937 SLC35B3Q9H1N7 401 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 ZNF586Q9NXT0 402 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 TNFSF18Q9UNG2 199 aa2.64□□□□□ -1.99
NUP88-202ENST00000570937 TRAV10A0A0B4J240 114 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 A0A0D9SG52 128 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 TRBV7-9A0A0J9YWB2 115 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 KANTRA0A1W2PQU2 76 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 HMSDA8MTL9 139 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 A8MTW9 85 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 H3BTX0 84 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 M0R2Z0 102 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 DEFB4AO15263 64 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 CXorf1O96002 111 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 SLC25A5P05141 298 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 GPX1P07203 203 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 OR10J4P0C629 311 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 RBMY1A1P0DJD3 496 aaKnown RBP2.63□□□□□ -1.99
NUP88-202ENST00000570937 RBMY1CP0DJD4 496 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 PYYP10082 97 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 HTN1P15515 57 aa2.63□□□□□ -1.99
NUP88-202ENST00000570937 HLA-DMBP28068 263 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms