RNA–Protein interactions for RNA: ENST00000570727.5

NDE1-203, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 4

Gene NDE1, Length 588 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-203ENST00000570727 DEFA1P59665 94 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 DEFA3P59666 94 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 HSD17B11Q8NBQ5 300 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 ATP6V0E2Q8NHE4 81 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 GTSF1LQ9H1H1 148 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 EPDR1Q9UM22 224 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 BOLA1Q9Y3E2 137 aa9.84□□□□□ -0.83
NDE1-203ENST00000570727 GGTLC3B5MD39 225 aa9.83□□□□□ -0.84
NDE1-203ENST00000570727 FAM229AH3BQW9 127 aa9.83□□□□□ -0.84
NDE1-203ENST00000570727 ATP6V0CP27449 155 aa9.83□□□□□ -0.84
NDE1-203ENST00000570727 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
NDE1-203ENST00000570727 SMUG1Q53HV7 270 aa9.83□□□□□ -0.84
NDE1-203ENST00000570727 PRNTQ86SH4 94 aa9.83□□□□□ -0.84
NDE1-203ENST00000570727 PSMG3Q9BT73 122 aaPredicted RBP9.83□□□□□ -0.84
NDE1-203ENST00000570727 K7EQM0 130 aa9.82□□□□□ -0.84
NDE1-203ENST00000570727 MGST1P10620 155 aaKnown RBP9.82□□□□□ -0.84
NDE1-203ENST00000570727 Q8N3U1 123 aa9.82□□□□□ -0.84
NDE1-203ENST00000570727 LINC00479Q96M42 142 aa9.82□□□□□ -0.84
NDE1-203ENST00000570727 Q9UF83 564 aa9.82□□□□□ -0.84
NDE1-203ENST00000570727 IGKV3D-20A0A0C4DH25 116 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 SERF2P84101 59 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 WFDC2Q14508 124 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 CYB561D1Q8N8Q1 229 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 AQP10Q96PS8 301 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 PARLQ9H300 379 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 ALG5Q9Y673 324 aa9.81□□□□□ -0.84
NDE1-203ENST00000570727 CXorf1O96002 111 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 MBP02144 154 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 LINC00694P0DN24 101 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 LAGE3Q14657 143 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 SAPCD1Q5SSQ6 148 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 SH3BGRL3Q9H299 93 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 JPT2Q9H910 190 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 TMEM167BQ9NRX6 74 aa9.8□□□□□ -0.84
NDE1-203ENST00000570727 TRAV34A0A0B4J273 112 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 C1QBP02746 253 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 ZFP69Q49AA0 526 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 Q5BKY6 102 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 PIK3CD-AS1Q5SR53 167 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 UFSP1Q6NVU6 142 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 ZFP2Q6ZN57 461 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 TM2D2Q9BX73 214 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 ACTR3CQ9C0K3 210 aaPredicted RBP9.79□□□□□ -0.84
NDE1-203ENST00000570727 TNFSF18Q9UNG2 199 aa9.79□□□□□ -0.84
NDE1-203ENST00000570727 A0A1W2PRE2 83 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 GAGE12JA6NER3 117 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 FABP5P3A8MUU1 101 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 A8MWV9 139 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 GAGE1Q13065 139 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 GAGE4Q13068 117 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 GAGE5Q13069 117 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 GAGE13Q4V321 117 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
NDE1-203ENST00000570727 OR2T35Q8NGX2 323 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 SAMD10Q9BYL1 202 aa9.78□□□□□ -0.84
NDE1-203ENST00000570727 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
NDE1-203ENST00000570727 CRIP1P50238 77 aa9.77□□□□□ -0.85
NDE1-203ENST00000570727 ZNF726P1Q15940 193 aa9.77□□□□□ -0.85
NDE1-203ENST00000570727 LGALSLQ3ZCW2 172 aaPredicted RBP9.77□□□□□ -0.85
NDE1-203ENST00000570727 DMRTA1Q5VZB9 504 aa9.77□□□□□ -0.85
NDE1-203ENST00000570727 Q6ZSA8 131 aa9.77□□□□□ -0.85
NDE1-203ENST00000570727 C14orf178Q8N769 122 aaPredicted RBP9.77□□□□□ -0.85
NDE1-203ENST00000570727 ARL2-SNX15V9GYD0 113 aa9.77□□□□□ -0.85
NDE1-203ENST00000570727 S100A4P26447 101 aaKnown RBP9.76□□□□□ -0.85
NDE1-203ENST00000570727 IL36BQ9NZH7 164 aa9.76□□□□□ -0.85
NDE1-203ENST00000570727 TRAV8-3A0A0A6YYJ7 113 aa9.75□□□□□ -0.85
NDE1-203ENST00000570727 LECT2O14960 151 aa9.75□□□□□ -0.85
NDE1-203ENST00000570727 ASIPP42127 132 aa9.75□□□□□ -0.85
NDE1-203ENST00000570727 DNLZQ5SXM8 178 aa9.75□□□□□ -0.85
NDE1-203ENST00000570727 RPL7L1Q6DKI1 246 aaKnown RBP9.75□□□□□ -0.85
NDE1-203ENST00000570727 RNF222A6NCQ9 220 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 B4DEV8 164 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 KRBOX1C9JBD0 128 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 UBE2G2P60604 165 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 DNAJC30Q96LL9 226 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 MED28Q9H204 178 aa9.74□□□□□ -0.85
NDE1-203ENST00000570727 A0A087WWC5 75 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 FAM74A7A6NL05 159 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 H3BVH4 76 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 PEX7O00628 323 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 IFNA7P01567 189 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 ARMS2P0C7Q2 107 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
NDE1-203ENST00000570727 COX8CQ7Z4L0 72 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 Q86TA4 180 aa9.73□□□□□ -0.85
NDE1-203ENST00000570727 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.72□□□□□ -0.85
NDE1-203ENST00000570727 CTXND1A0A1B0GTU2 59 aa9.72□□□□□ -0.85
NDE1-203ENST00000570727 TOR2AQ5JU69 321 aa9.72□□□□□ -0.85
NDE1-203ENST00000570727 NIT1Q86X76 327 aa9.72□□□□□ -0.85
NDE1-203ENST00000570727 ZC2HC1AQ96GY0 325 aa9.72□□□□□ -0.85
NDE1-203ENST00000570727 LRP1Q07954 4544 aaKnown RBP9.72□□□□□ -0.85
NDE1-203ENST00000570727 GRIFINA4D1Z8 144 aa9.71□□□□□ -0.86
NDE1-203ENST00000570727 M0R036 132 aa9.71□□□□□ -0.86
NDE1-203ENST00000570727 SH2D1AO60880 128 aa9.71□□□□□ -0.86
NDE1-203ENST00000570727 GIPP09681 153 aaPredicted RBP9.71□□□□□ -0.86
NDE1-203ENST00000570727 LINC01620Q4KN68 170 aa9.71□□□□□ -0.86
NDE1-203ENST00000570727 INO80EQ8NBZ0 244 aaPredicted RBP9.71□□□□□ -0.86
NDE1-203ENST00000570727 HIST1H2BAQ96A08 127 aa9.71□□□□□ -0.86
NDE1-203ENST00000570727 SFRP2Q96HF1 295 aa9.71□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms