RNA–Protein interactions for RNA: ENST00000570475.5

USP43-202, Transcript of ubiquitin specific peptidase 43, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene USP43, Length 3,500 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-202ENST00000570475 TRAV8-2A0A0B4J237 113 aa11.72□□□□□ -0.53
USP43-202ENST00000570475 H7C1H1 209 aa11.72□□□□□ -0.53
USP43-202ENST00000570475 RHPN1-AS1Q9BWJ2 59 aa11.72□□□□□ -0.53
USP43-202ENST00000570475 HHLA3Q9XRX5 114 aa11.72□□□□□ -0.53
USP43-202ENST00000570475 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.53
USP43-202ENST00000570475 TRBV7-1A0A0A6YYK4 115 aa11.71□□□□□ -0.53
USP43-202ENST00000570475 PGPEP1Q9NXJ5 209 aa11.71□□□□□ -0.53
USP43-202ENST00000570475 SIRPDQ9H106 197 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 IGHV3-73A0A0B4J1V6 119 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 Q1RN00 199 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 MAPK1IP1LQ8NDC0 245 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 PRADC1Q9BSG0 188 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 TSSC4Q9Y5U2 329 aaPredicted RBP11.7□□□□□ -0.54
USP43-202ENST00000570475 A0A087WX48 190 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 CLPSL1A2RUU4 121 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 HLA-DRB4P13762 266 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 DPH3P1Q9H4G8 78 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 SMPXQ9UHP9 88 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 MOB4Q9Y3A3 225 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 HLA-DRB4X5D2U9 266 aa11.7□□□□□ -0.54
USP43-202ENST00000570475 SIVA1O15304 175 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 HOXA3O43365 443 aaPredicted RBP11.69□□□□□ -0.54
USP43-202ENST00000570475 ATP5J2P56134 94 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 ORMDL2Q53FV1 153 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 BEX4Q9NWD9 120 aaPredicted RBP11.69□□□□□ -0.54
USP43-202ENST00000570475 F8VRH5 84 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 GAGE13Q4V321 117 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 C9orf139Q6ZV77 190 aa11.69□□□□□ -0.54
USP43-202ENST00000570475 PRSS29PA6NIE9 313 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 PLNP26678 52 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 DUSP14O95147 198 aaKnown RBP11.68□□□□□ -0.54
USP43-202ENST00000570475 IGHV4-38-2P0DP08 117 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
USP43-202ENST00000570475 PSMG4Q5JS54 123 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 HRNRQ86YZ3 2850 aaPredicted RBP11.68□□□□□ -0.54
USP43-202ENST00000570475 LINC01549A6NIU2 74 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 IGLL5B9A064 214 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 Q8N6K4 173 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 KIR2DL4Q99706 377 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 TP53TG1Q9Y2A0 90 aa11.68□□□□□ -0.54
USP43-202ENST00000570475 IGHV7-4-1A0A0J9YVY3 117 aa11.67□□□□□ -0.54
USP43-202ENST00000570475 ZNF48Q96MX3 618 aaPredicted RBP11.67□□□□□ -0.54
USP43-202ENST00000570475 EDN2P20800 178 aa11.67□□□□□ -0.54
USP43-202ENST00000570475 GNLYP22749 145 aa11.67□□□□□ -0.54
USP43-202ENST00000570475 C5orf56Q8N8D9 126 aa11.67□□□□□ -0.54
USP43-202ENST00000570475 KLK9Q9UKQ9 250 aa11.67□□□□□ -0.54
USP43-202ENST00000570475 GATD1Q8NB37 220 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 G3V4G9 280 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 PRSS2P07478 247 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 MYMXA0A1B0GTQ4 84 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 UFSP1Q6NVU6 142 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 Q6ZS46 218 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 NRACQ8N912 160 aa11.66□□□□□ -0.54
USP43-202ENST00000570475 HERVK_113P61574 105 aa11.65□□□□□ -0.54
USP43-202ENST00000570475 PKD1L2Q7Z442 2459 aa11.65□□□□□ -0.54
USP43-202ENST00000570475 C1orf122Q6ZSJ8 110 aa11.65□□□□□ -0.54
USP43-202ENST00000570475 TMEM238C9JI98 176 aa11.65□□□□□ -0.54
USP43-202ENST00000570475 C11orf71Q6IPW1 123 aa11.65□□□□□ -0.54
USP43-202ENST00000570475 NOTCH2Q04721 2471 aa11.65□□□□□ -0.55
USP43-202ENST00000570475 RASL10AQ92737 203 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 IGHV4-61A0A0C4DH41 118 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 OVOL1O14753 267 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 NBL1P41271 181 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 LMO4P61968 165 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 RAX2Q96IS3 184 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 OPRPNQ99935 248 aaPredicted RBP11.64□□□□□ -0.55
USP43-202ENST00000570475 C19orf84I3L1E1 186 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 AZU1P20160 251 aa11.64□□□□□ -0.55
USP43-202ENST00000570475 RBAKDNA6NC62 111 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 NRGNQ92686 78 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 SIGMAR1Q99720 223 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 SPINK13Q1W4C9 94 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 C9orf47Q6ZRZ4 202 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 MRAP2Q96G30 205 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 JMJD1CQ15652 2540 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 NPC2P61916 151 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 EBI3Q14213 229 aa11.63□□□□□ -0.55
USP43-202ENST00000570475 ABCA2Q9BZC7 2435 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 IGHV1-69DA0A0B4J2H0 117 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 IGHV1-69P01742 117 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 LGALS3P17931 250 aaKnown RBP11.62□□□□□ -0.55
USP43-202ENST00000570475 ID1P41134 155 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 FBXL19-AS1Q494R0 122 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 PLEKHB2Q96CS7 222 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 CCL19Q99731 98 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 CUBNO60494 3623 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 TRAV2A0A0B4J234 112 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 TMEM238LA0A1B0GVL6 79 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 A6NJY4 79 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 KNCNA6PVL3 124 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 ADARB2-AS1A8MUL3 147 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 UCNP55089 124 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 RNASE13Q5GAN3 156 aaKnown RBP11.62□□□□□ -0.55
USP43-202ENST00000570475 PTH2Q96A98 100 aa11.62□□□□□ -0.55
USP43-202ENST00000570475 INSL3P51460 131 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 FOXI2Q6ZQN5 318 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 BAALCQ8WXS3 180 aa11.61□□□□□ -0.55
USP43-202ENST00000570475 TMEM190Q8WZ59 177 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms