RNA–Protein interactions for RNA: ENST00000569827.5

CAPN3-220, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 908 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-220ENST00000569827 LINC00694P0DN24 101 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 FAM74A1Q5RGS3 127 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 PRNTQ86SH4 94 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 CIRBP-AS1Q8TBR5 109 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 SCGB1C1Q8TD33 95 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 PARLQ9H300 379 aa7.9□□□□□ -1.14
CAPN3-220ENST00000569827 TRAV8-3A0A0A6YYJ7 113 aa7.89□□□□□ -1.15
CAPN3-220ENST00000569827 MGST1P10620 155 aaKnown RBP7.89□□□□□ -1.15
CAPN3-220ENST00000569827 HNRNPA3P51991 378 aaKnown RBP7.89□□□□□ -1.15
CAPN3-220ENST00000569827 SYT8Q8NBV8 401 aa7.89□□□□□ -1.15
CAPN3-220ENST00000569827 NDFIP1Q9BT67 221 aa7.89□□□□□ -1.15
CAPN3-220ENST00000569827 CCDC32Q9BV29 185 aa7.89□□□□□ -1.15
CAPN3-220ENST00000569827 PLA2G2DQ9UNK4 145 aa7.89□□□□□ -1.15
CAPN3-220ENST00000569827 A0A1W2PPV4 95 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 GGTLC3B5MD39 225 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 MPC2O95563 127 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 LGALSLQ3ZCW2 172 aaPredicted RBP7.88□□□□□ -1.15
CAPN3-220ENST00000569827 SERTAD4-AS1Q5TG53 156 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 MZT2BQ6NZ67 158 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 PQLC2Q6ZP29 291 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 ENKURQ8TC29 256 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 CHAC1Q9BUX1 264 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 KLK12Q9UKR0 248 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 PSG8Q9UQ74 426 aa7.88□□□□□ -1.15
CAPN3-220ENST00000569827 TAAR5O14804 337 aa7.87□□□□□ -1.15
CAPN3-220ENST00000569827 IGLV2-11P01706 119 aa7.87□□□□□ -1.15
CAPN3-220ENST00000569827 TCRAP04437 139 aa7.87□□□□□ -1.15
CAPN3-220ENST00000569827 RPL12P30050 165 aaKnown RBP7.87□□□□□ -1.15
CAPN3-220ENST00000569827 ACOT6Q3I5F7 207 aaPredicted RBP7.87□□□□□ -1.15
CAPN3-220ENST00000569827 UBE2WQ96B02 151 aa7.87□□□□□ -1.15
CAPN3-220ENST00000569827 TNXBP22105 4242 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 TRAV34A0A0B4J273 112 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 IGKV3D-20A0A0C4DH25 116 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 H3BVH4 76 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 FLI1Q01543 452 aaPredicted RBP7.86□□□□□ -1.15
CAPN3-220ENST00000569827 ASAH1Q13510 395 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 SMUG1Q53HV7 270 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 CYB561D1Q8N8Q1 229 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 OR10G9Q8NGN4 311 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 OR10G7Q8NGN6 311 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 LINC00479Q96M42 142 aa7.86□□□□□ -1.15
CAPN3-220ENST00000569827 RNF222A6NCQ9 220 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 CIDEAO60543 219 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 S100A4P26447 101 aaKnown RBP7.85□□□□□ -1.15
CAPN3-220ENST00000569827 GCHFRP30047 84 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 CDC34P49427 236 aaPredicted RBP7.85□□□□□ -1.15
CAPN3-220ENST00000569827 ZFP69Q49AA0 526 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 FAM74A4Q5TZK3 123 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 NIT1Q86X76 327 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 C5orf17Q8NAS9 161 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 URGCP-MRPS24S4R325 110 aa7.85□□□□□ -1.15
CAPN3-220ENST00000569827 A0A087WWL8 130 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 A8MWV9 139 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 INMT-MINDY4F8WBC2 141 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 OXTP01178 125 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 SUMO1P63165 101 aaKnown RBP7.84□□□□□ -1.15
CAPN3-220ENST00000569827 CYCSP99999 105 aaKnown RBP7.84□□□□□ -1.15
CAPN3-220ENST00000569827 IFITM3Q01628 133 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 TOR2AQ5JU69 321 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 DMRTA1Q5VZB9 504 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 UFSP1Q6NVU6 142 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 Q8N976 141 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 HSD17B11Q8NBQ5 300 aa7.84□□□□□ -1.15
CAPN3-220ENST00000569827 GRIFINA4D1Z8 144 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 M0R036 132 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 SSNA1O43805 119 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 STAG3L2P0CL84 134 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 STAG3L3P0CL85 134 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 RPL37AP61513 92 aaKnown RBP7.83□□□□□ -1.16
CAPN3-220ENST00000569827 ZFP2Q6ZN57 461 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 ARL6IP6Q8N6S5 226 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 RAB24Q969Q5 203 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 PTH2Q96A98 100 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 RMI2Q96E14 147 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 DAZAP1Q96EP5 407 aaKnown RBP7.83□□□□□ -1.16
CAPN3-220ENST00000569827 EPDR1Q9UM22 224 aa7.83□□□□□ -1.16
CAPN3-220ENST00000569827 K7EQM0 130 aa7.82□□□□□ -1.16
CAPN3-220ENST00000569827 ASIPP42127 132 aa7.82□□□□□ -1.16
CAPN3-220ENST00000569827 SH3BGRL3Q9H299 93 aa7.82□□□□□ -1.16
CAPN3-220ENST00000569827 ARL2-SNX15V9GYD0 113 aa7.82□□□□□ -1.16
CAPN3-220ENST00000569827 LRP2P98164 4655 aa7.82□□□□□ -1.16
CAPN3-220ENST00000569827 A0A087WWC5 75 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 A0A087WX48 190 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 TMSB15BA0A087X1C1 80 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 SERTM2A0A1B0GWG4 89 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 UPK1BO75841 260 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 HLA-DQA1P01909 254 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 PET100P0DJ07 73 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 UBE2G2P60604 165 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 OR2G3Q8NGZ4 309 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 COX11Q9Y6N1 276 aa7.81□□□□□ -1.16
CAPN3-220ENST00000569827 B4DEV8 164 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 PANO1I0J062 215 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 ARMS2P0C7Q2 107 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 ATP6V0CP27449 155 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 FGF8P55075 233 aaPredicted RBP7.8□□□□□ -1.16
CAPN3-220ENST00000569827 CLPSL2Q6UWE3 100 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 C15orf54Q8N8G6 183 aa7.8□□□□□ -1.16
CAPN3-220ENST00000569827 SUN5Q8TC36 379 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms