RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 M0R2P5 195 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 CXCL1P09341 107 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 ARMS2P0C7Q2 107 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 RPL19P84098 196 aaKnown RBP11.46□□□□□ -0.57
USB1-215ENST00000569252 SYT8Q8NBV8 401 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 OR10G8Q8NGN5 311 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 SFRP2Q96HF1 295 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 SEC11CQ9BY50 192 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 OSTCQ9NRP0 149 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 IL36BQ9NZH7 164 aa11.46□□□□□ -0.57
USB1-215ENST00000569252 GAGE12BA1L429 117 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 PLAC8L1A1L4L8 177 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 A8MWL6 223 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 H3BVH4 76 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 GAGE7O76087 117 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 GAGE12FP0CL80 117 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 GAGE12GP0CL81 117 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 GAGE12IP0CL82 117 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 DNLZQ5SXM8 178 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 ISOC2Q96AB3 205 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 TPPP3Q9BW30 176 aa11.45□□□□□ -0.58
USB1-215ENST00000569252 A0A1W2PPQ1 181 aa11.44□□□□□ -0.58
USB1-215ENST00000569252 SPINK4O60575 86 aa11.44□□□□□ -0.58
USB1-215ENST00000569252 NANOS2P60321 138 aaKnown RBP11.44□□□□□ -0.58
USB1-215ENST00000569252 ZNF876PQ49A33 203 aa11.44□□□□□ -0.58
USB1-215ENST00000569252 F2Z2F3 143 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 PPP1R2P9O14990 202 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 MT-ND4LP03901 98 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 MED14OSP0DP75 135 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 RNASE3P12724 160 aaKnown RBP11.43□□□□□ -0.58
USB1-215ENST00000569252 FER1L6-AS1Q8NA97 138 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 CELA1Q9UNI1 258 aa11.43□□□□□ -0.58
USB1-215ENST00000569252 GZMBP10144 247 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 C12orf74Q32Q52 190 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 CT83Q5H943 113 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 SPANXN1Q5VSR9 72 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 Q6ZTI0 123 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 ZFP82Q8N141 532 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 RASL10AQ92737 203 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 BORCS7Q96B45 105 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 C9orf85Q96MD7 179 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 NDUFAF3Q9BU61 184 aa11.42□□□□□ -0.58
USB1-215ENST00000569252 MRPL16Q9NX20 251 aaKnown RBP11.42□□□□□ -0.58
USB1-215ENST00000569252 HTN3P15516 51 aa11.41□□□□□ -0.58
USB1-215ENST00000569252 PTH2Q96A98 100 aa11.41□□□□□ -0.58
USB1-215ENST00000569252 ANAPC16Q96DE5 110 aa11.41□□□□□ -0.58
USB1-215ENST00000569252 TRAV10A0A0B4J240 114 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 M0R381 172 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 ATP5G1P05496 136 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 SSTP61278 116 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 CACNG7P62955 275 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 SLC7A5P1Q8MH63 180 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 OR4C5Q8NGB2 326 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 TSKUQ8WUA8 353 aa11.4□□□□□ -0.58
USB1-215ENST00000569252 PIK3CD-AS1Q5SR53 167 aa11.39□□□□□ -0.59
USB1-215ENST00000569252 Q6ZTC4 211 aa11.39□□□□□ -0.59
USB1-215ENST00000569252 SSBP4Q9BWG4 385 aaPredicted RBP11.39□□□□□ -0.59
USB1-215ENST00000569252 GFRA4Q9GZZ7 299 aa11.39□□□□□ -0.59
USB1-215ENST00000569252 SCRT2Q9NQ03 307 aa11.39□□□□□ -0.59
USB1-215ENST00000569252 HERC2O95714 4834 aa11.39□□□□□ -0.59
USB1-215ENST00000569252 DEFB131BA0A096LNP1 70 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 FAM231BA6NCW3 169 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 A8MWV9 139 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 SNAI2O43623 268 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 SMIM17P0DL12 118 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 ADCYAP1P18509 176 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 LYZL1Q6UWQ5 148 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 PHLDA1Q8WV24 401 aaPredicted RBP11.38□□□□□ -0.59
USB1-215ENST00000569252 V9GYV3 84 aa11.38□□□□□ -0.59
USB1-215ENST00000569252 F5H768 121 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 CIDEAO60543 219 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 APOC3P02656 99 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 RNF212Q495C1 297 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 C10orf91Q5T1B1 145 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 DMRTA1Q5VZB9 504 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 WDR73Q6P4I2 378 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 SMIM15Q7Z3B0 74 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 ZNF575Q86XF7 245 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 LINC00612Q8N6U2 182 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 PGLYRP4Q96LB8 373 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 C18orf15Q96N68 181 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 NAT8BQ9UHF3 227 aa11.37□□□□□ -0.59
USB1-215ENST00000569252 KLK5Q9Y337 293 aaPredicted RBP11.37□□□□□ -0.59
USB1-215ENST00000569252 TRAV4A0A0B4J268 109 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 TRGV4A0A0C4DH28 118 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 MUC21A0A0G2JKD1 596 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 MUC21A0A140T8X8 626 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 IGHV3-53P01767 116 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 IGLC6P0CF74 106 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 SLAQ13239 276 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 TWIST1Q15672 202 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 SVBPQ8N300 66 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 CTDSP1Q9GZU7 261 aa11.36□□□□□ -0.59
USB1-215ENST00000569252 CARHSP1Q9Y2V2 147 aaKnown RBP11.36□□□□□ -0.59
USB1-215ENST00000569252 NUPR2A6NF83 97 aa11.35□□□□□ -0.59
USB1-215ENST00000569252 HIGD1CA8MV81 97 aa11.35□□□□□ -0.59
USB1-215ENST00000569252 SNAPINO95295 136 aa11.35□□□□□ -0.59
USB1-215ENST00000569252 FOXA3P55318 350 aaPredicted RBP11.35□□□□□ -0.59
USB1-215ENST00000569252 OR10AG1Q8NH19 301 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms