RNA–Protein interactions for RNA: ENST00000568890.5

CNEP1R1-210, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best)

Gene CNEP1R1, Length 1,992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-210ENST00000568890 SCRT2Q9NQ03 307 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 F5H768 121 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 S100A4P26447 101 aaKnown RBP11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 LINC01551Q86U37 167 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 SMDT1Q9H4I9 107 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 APLNQ9ULZ1 77 aa11.68□□□□□ -0.54
CNEP1R1-210ENST00000568890 IGHV4-4A0A075B6R2 117 aa11.67□□□□□ -0.54
CNEP1R1-210ENST00000568890 JPT2Q9H910 190 aa11.67□□□□□ -0.54
CNEP1R1-210ENST00000568890 TMEM88Q6PEY1 159 aa11.67□□□□□ -0.54
CNEP1R1-210ENST00000568890 KLK5Q9Y337 293 aaPredicted RBP11.67□□□□□ -0.54
CNEP1R1-210ENST00000568890 MUC21A0A0G2JKD1 596 aa11.66□□□□□ -0.54
CNEP1R1-210ENST00000568890 MUC21A0A140T8X8 626 aa11.66□□□□□ -0.54
CNEP1R1-210ENST00000568890 SSBP4Q9BWG4 385 aaPredicted RBP11.66□□□□□ -0.54
CNEP1R1-210ENST00000568890 FHL2Q14192 279 aa11.65□□□□□ -0.54
CNEP1R1-210ENST00000568890 OR2D3Q8NGH3 330 aa11.65□□□□□ -0.54
CNEP1R1-210ENST00000568890 DAZAP1Q96EP5 407 aaKnown RBP11.65□□□□□ -0.54
CNEP1R1-210ENST00000568890 LY96Q9Y6Y9 160 aa11.65□□□□□ -0.54
CNEP1R1-210ENST00000568890 P01737 135 aa11.65□□□□□ -0.55
CNEP1R1-210ENST00000568890 VSIG2Q96IQ7 327 aa11.65□□□□□ -0.55
CNEP1R1-210ENST00000568890 TMEM241Q24JQ0 296 aa11.64□□□□□ -0.55
CNEP1R1-210ENST00000568890 CFAP126Q5VTH2 177 aa11.64□□□□□ -0.55
CNEP1R1-210ENST00000568890 OR10AG1Q8NH19 301 aa11.64□□□□□ -0.55
CNEP1R1-210ENST00000568890 PTH2Q96A98 100 aa11.64□□□□□ -0.55
CNEP1R1-210ENST00000568890 SACSQ9NZJ4 4579 aa11.64□□□□□ -0.55
CNEP1R1-210ENST00000568890 TRAV26-1A0A087WT03 109 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 RPL23P62829 140 aaKnown RBP11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 SOHLH1Q5JUK2 328 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 SAMD10Q9BYL1 202 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 KMT2AQ03164 3969 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 A0A0J9YY99 117 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 CXCL1P09341 107 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 IGLC6P0CF74 106 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 SSTP61278 116 aa11.63□□□□□ -0.55
CNEP1R1-210ENST00000568890 SNAI2O43623 268 aa11.62□□□□□ -0.55
CNEP1R1-210ENST00000568890 FAM74A3Q4VXF1 159 aa11.62□□□□□ -0.55
CNEP1R1-210ENST00000568890 BIN3Q9NQY0 253 aa11.62□□□□□ -0.55
CNEP1R1-210ENST00000568890 PHLDA3Q9Y5J5 127 aa11.62□□□□□ -0.55
CNEP1R1-210ENST00000568890 NACAE9PAV3 2078 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 IGHV3-73A0A0B4J1V6 119 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 TRAV4A0A0B4J268 109 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 M0R381 172 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 RS1O15537 224 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 OR5AL1P0C617 328 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 Q6ZSN1 163 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 FAM231DQ6ZW35 169 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 OR4C5Q8NGB2 326 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 NDUFAF3Q9BU61 184 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 UFSP1Q6NVU6 142 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 GTSF1Q8WW33 167 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 ISOC2Q96AB3 205 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 HHLA3Q9XRX5 114 aa11.61□□□□□ -0.55
CNEP1R1-210ENST00000568890 MED14OSP0DP75 135 aa11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 ERVFC1-1P60608 527 aa11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 FAM210BQ96KR6 192 aa11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 RPP21Q9H633 154 aaKnown RBP11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 MSRB1Q9NZV6 116 aa11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 NAT8Q9UHE5 227 aa11.6□□□□□ -0.55
CNEP1R1-210ENST00000568890 CRYGDP07320 174 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 CRYBA4P53673 196 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 PIK3CD-AS1Q5SR53 167 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 TPPP3Q9BW30 176 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 Q9UF83 564 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 DNAH1Q9P2D7 4330 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 NXPH4O95158 308 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 LYZL1Q6UWQ5 148 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 FER1L6-AS1Q8NA97 138 aa11.59□□□□□ -0.55
CNEP1R1-210ENST00000568890 HYDINQ4G0P3 5121 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 LINC00862A6NCI5 91 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 ADIRFQ15847 76 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 V9GYV3 84 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 VPS13DQ5THJ4 4388 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 A0A087WWL8 130 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 TRGV4A0A0C4DH28 118 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 GATCO43716 136 aaKnown RBP11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 ADCYAP1P18509 176 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 RPS20P60866 119 aaKnown RBP11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 SFRP2Q96HF1 295 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 OSTCQ9NRP0 149 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 PRO0255Q9UI72 69 aa11.58□□□□□ -0.56
CNEP1R1-210ENST00000568890 RYR3Q15413 4870 aa11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 LOC100131303A0A0U1RQF7 123 aa11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 NUDT3O95989 172 aa11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 GATA1P15976 413 aaPredicted RBP11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 TCTAP57738 103 aa11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 COMMD7Q86VX2 200 aa11.57□□□□□ -0.56
CNEP1R1-210ENST00000568890 ZFP82Q8N141 532 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 SLC25A29Q8N8R3 303 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 LINC00476Q8WZB0 136 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 LCE6AA0A183 80 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 A8MWV9 139 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 PAX4O43316 350 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 SPANXN1Q5VSR9 72 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 SYT8Q8NBV8 401 aa11.56□□□□□ -0.56
CNEP1R1-210ENST00000568890 A0A096LPF7 62 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 TMEM218A2RU14 115 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 XKRY2A2RUG3 117 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 H3BNG1 76 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 NTF3P20783 257 aa11.55□□□□□ -0.56
CNEP1R1-210ENST00000568890 FOXA3P55318 350 aaPredicted RBP11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms