RNA–Protein interactions for RNA: ENST00000568358.1

HERPUD1-213, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 751 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-213ENST00000568358 NFE4Q86UQ8 179 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 ZNF575Q86XF7 245 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 PCNPQ8WW12 178 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 ST6GAL2Q96JF0 529 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 C18orf15Q96N68 181 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 VGLL1Q99990 258 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 SLC25A2Q9BXI2 301 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 KRTAP4-5Q9BYR2 181 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 WDR61Q9GZS3 305 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 Q9H3A6 140 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 C11orf1Q9H5F2 150 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 PRO0255Q9UI72 69 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 HHLA3Q9XRX5 114 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 MRPS16Q9Y3D3 137 aaKnown RBP3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 KLF12Q9Y4X4 402 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 VPS13DQ5THJ4 4388 aa3.23□□□□□ -1.89
HERPUD1-213ENST00000568358 A0A096LPF7 62 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 SPINK4O60575 86 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 SIX6O95475 246 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 IGHV3-53P01767 116 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 SRIP30626 198 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 UBE2L3P68036 154 aaKnown RBP3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 FOXI1Q12951 378 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 ACOT6Q3I5F7 207 aaPredicted RBP3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 C5orf47Q569G3 176 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 GCSAMLQ5JQS6 135 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 FFAR4Q5NUL3 377 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 NEGR1Q7Z3B1 354 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 SH2D6Q7Z4S9 175 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 C11orf72Q8NBR9 251 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 PPP1R1CQ8WVI7 109 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 URB1-AS1Q96HZ7 61 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 VSIG2Q96IQ7 327 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 FAM19A4Q96LR4 140 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 HYLS1Q96M11 299 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 ATP5SQ99766 215 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 TXNDC17Q9BRA2 123 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 OR5AC2Q9NZP5 309 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 LENEPQ9Y5L5 61 aa3.22□□□□□ -1.89
HERPUD1-213ENST00000568358 DNAH10Q8IVF4 4471 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 A0A087WZ39 114 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 PGPA6NDG6 321 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 FAM74A7A6NL05 159 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 C9JCJ5 164 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 K7EP13 123 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 SNAI2O43623 268 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 NXPH4O95158 308 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 MPC2O95563 127 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 ORM1P02763 201 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 EVI2AP22794 236 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 RPL12P30050 165 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 CRYBA4P53673 196 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 ERVFC1-1P60608 527 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 ZNF266Q14584 549 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 TMEM183BQ1AE95 376 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 FAM74A3Q4VXF1 159 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 MUC21Q5SSG8 566 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 LYPD5Q6UWN5 251 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 TMEM183AQ8IXX5 376 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 LINC01561Q8N1V8 128 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 ZFAND2AQ8N6M9 145 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 INO80EQ8NBZ0 244 aaPredicted RBP3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 FXYD5Q96DB9 178 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 KCNS1Q96KK3 526 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 FAM167A-AS1Q96KT0 104 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 C8orf49Q96NF6 230 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 NDFIP1Q9BT67 221 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 SMIM3Q9BZL3 60 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 OTORQ9NRC9 128 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 MRPL16Q9NX20 251 aaKnown RBP3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 TP53TG3Q9ULZ0 132 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 HSPB11Q9Y547 144 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 LY96Q9Y6Y9 160 aa3.21□□□□□ -1.9
HERPUD1-213ENST00000568358 HECTD4Q9Y4D8 3996 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 TRAV21A0A0B4J279 112 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 hDV102S1A0JD36 115 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 M0R2P5 195 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 CDC34P49427 236 aaPredicted RBP3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 H2BFSP57053 126 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 LINC00315P59091 139 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 RPL24P83731 157 aaKnown RBP3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 FHL2Q14192 279 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 Q6AWC8 147 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 Q6ZVQ6 151 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 C10orf126Q8N4M7 172 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 OR10G4Q8NGN3 311 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 OR10G9Q8NGN4 311 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 OR10G7Q8NGN6 311 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 Q8TAT8 98 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 TMED6Q8WW62 240 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 RASL10AQ92737 203 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 PHYHIPLQ96FC7 376 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 PRADC1Q9BSG0 188 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 MARVELD1Q9BSK0 173 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 MLST8Q9BVC4 326 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 SH3BGRL3Q9H299 93 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 SDF2L1Q9HCN8 221 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 SCRT2Q9NQ03 307 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 MDFICQ9P1T7 246 aa3.2□□□□□ -1.9
HERPUD1-213ENST00000568358 URGCP-MRPS24S4R325 110 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms