RNA–Protein interactions for RNA: ENST00000568290.1

ATXN3-250, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 671 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-250ENST00000568290 DLX4Q92988 240 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 TTC28Q96AY4 2481 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 PLEKHB2Q96CS7 222 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 SPANXB1Q9NS25 103 aaPredicted RBP5.78□□□□□ -1.48
ATXN3-250ENST00000568290 C11orf21Q9P2W6 132 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 WDFY3Q8IZQ1 3526 aa5.78□□□□□ -1.48
ATXN3-250ENST00000568290 IGHV3-49A0A0A0MS15 119 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 TRBV27A0A0K0K1C4 114 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 PRSS29PA6NIE9 313 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 CD7P09564 240 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 FXYD2P54710 66 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 NSUN5P1Q3KNT7 163 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 LINC01356Q8N9X3 169 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 BAALCQ8WXS3 180 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 EDA2RQ9HAV5 297 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 MRPL16Q9NX20 251 aaKnown RBP5.77□□□□□ -1.49
ATXN3-250ENST00000568290 PEMTQ9UBM1 199 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 VPS13AQ96RL7 3174 aa5.77□□□□□ -1.49
ATXN3-250ENST00000568290 ZNF292O60281 2723 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 TPRP12270 2363 aaKnown RBP5.76□□□□□ -1.49
ATXN3-250ENST00000568290 IGHV1OR15-1A0A075B7D0 117 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 TMEM238C9JI98 176 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 H3BS24 57 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 RHODO00212 210 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 GATA1P15976 413 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-250ENST00000568290 POLR2KP53803 58 aaKnown RBP5.76□□□□□ -1.49
ATXN3-250ENST00000568290 CMC4P56277 68 aaPredicted RBP5.76□□□□□ -1.49
ATXN3-250ENST00000568290 ZFP2Q6ZN57 461 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 ZNF575Q86XF7 245 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 PTH2Q96A98 100 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 SIGMAR1Q99720 223 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 PRADC1Q9BSG0 188 aa5.76□□□□□ -1.49
ATXN3-250ENST00000568290 SPEGQ15772 3267 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 TRBV7-3A0A075B6L6 115 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 IGKV2D-26A0A0A0MRZ7 120 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 TRAV26-2A0A0B4J265 109 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 SDHAF1A6NFY7 115 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 A8MWV9 139 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 TMEM262E9PQX1 116 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 I3L3M4 83 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 LEPROTO15243 131 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 LGALS1P09382 135 aaKnown RBP5.75□□□□□ -1.49
ATXN3-250ENST00000568290 RNASE3P12724 160 aaKnown RBP5.75□□□□□ -1.49
ATXN3-250ENST00000568290 CDSNQ15517 529 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 ZNF56Q15929 161 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 LY6EQ16553 131 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 CD300EQ496F6 205 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-250ENST00000568290 UNQ9165/PRO28630Q6UXU0 137 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 LCNL1Q6ZST4 164 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 Q71RC1 249 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-250ENST00000568290 C20orf173Q96LM9 149 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 MDFICQ9P1T7 246 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 TP53TG1Q9Y2A0 90 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 ANKRD11Q6UB99 2663 aaPredicted RBP5.75□□□□□ -1.49
ATXN3-250ENST00000568290 APC2O95996 2303 aa5.75□□□□□ -1.49
ATXN3-250ENST00000568290 RIF1Q5UIP0 2472 aaKnown RBP5.74□□□□□ -1.49
ATXN3-250ENST00000568290 FREM2Q5SZK8 3169 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 PCNX1Q96RV3 2341 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 IGHV4-61A0A0C4DH41 118 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 A0A0J9YX75 114 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 LINC01548A6NM66 108 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 H3BMG7 143 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 J3KRW8 73 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 M0QXV9 152 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 IGHV3-11P01762 117 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 PSMB8P28062 276 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 CFHR3Q02985 330 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 Q5PR19 223 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 TMEM170BQ5T4T1 132 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 BRD3OSQ6XYD6 125 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 NFE4Q86UQ8 179 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 PHLDA1Q8WV24 401 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-250ENST00000568290 DNAJC30Q96LL9 226 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 UBE2E2Q96LR5 201 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 C9orf85Q96MD7 179 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 SPXQ9BT56 116 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 KLK15Q9H2R5 256 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 YAE1D1Q9NRH1 226 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 PYGO1Q9Y3Y4 419 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 ABCA1O95477 2261 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 ZFHX2Q9C0A1 2572 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-250ENST00000568290 MYO15AQ9UKN7 3530 aa5.74□□□□□ -1.49
ATXN3-250ENST00000568290 PTPRZ1P23471 2315 aaPredicted RBP5.74□□□□□ -1.49
ATXN3-250ENST00000568290 FRYQ5TBA9 3013 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 A0A1B0GV72 72 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 IGIPA6NJ69 53 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 K7EQG2 157 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 GNRH2O43555 120 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 COX6CP09669 75 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 GNLYP22749 145 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 ZNF415Q09FC8 603 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 XP32Q5T750 250 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 SUMO4Q6EEV6 95 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 DCANP1Q8TF63 244 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 SPANXA1Q9NS26 97 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 ZNF256Q9Y2P7 627 aaPredicted RBP5.73□□□□□ -1.49
ATXN3-250ENST00000568290 TNFRSF18Q9Y5U5 241 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 KIF25-AS1Q9Y6Z4 181 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 GVINP1Q7Z2Y8 2422 aa5.73□□□□□ -1.49
ATXN3-250ENST00000568290 DSPP15924 2871 aaKnown RBP5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 75.3 ms