RNA–Protein interactions for RNA: ENST00000567944.1

HERPUD1-212, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 435 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-212ENST00000567944 DGAT2L6Q6ZPD8 337 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 SGPP2Q8IWX5 399 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 MSRB3Q8IXL7 192 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF101Q8IZC7 436 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZIC4Q8N9L1 334 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 OR52P1PQ8NH57 321 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 OTOSQ8NHW6 89 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF721Q8TF20 911 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TMEM230Q96A57 120 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 NEURL3Q96EH8 262 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 FMC1Q96HJ9 113 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF355PQ9NSJ1 428 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAPPC1Q9Y5R8 145 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 PDZD2O15018 2839 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 FBN3Q75N90 2809 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 PLXNA2O75051 1894 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 ANKRD12Q6UB98 2062 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 MYO7BQ6PIF6 2116 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 TLN2Q9Y4G6 2542 aa2.05□□□□□ -2.08
HERPUD1-212ENST00000567944 NF1P21359 2839 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SPENQ96T58 3664 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV8-1A0A0A6YYK1 113 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 IGHV3-74A0A0B4J1X5 117 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV8-6A0A0B4J262 113 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 MUC21A0A0G2JKD1 596 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 IGHV5-10-1A0A0J9YXX1 117 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 MUC21A0A140T8X8 626 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SYS1-DBNDD2H3BUS1 97 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 H3BUT2 72 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 ATOX1O00244 68 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SOD1P00441 154 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 CXCL1P09341 107 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SCGB1C2P0DMR2 95 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 FGF6P10767 208 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 CTLA4P16410 223 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF708P17019 499 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 NPC2P61916 151 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SNRPGP62308 76 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 UBE2L3P68036 154 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 ADIGQ0VDE8 80 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 MPV17LQ2QL34 196 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 KRTAP21-3Q3LHN1 58 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 MPV17L2Q567V2 206 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 MRPL2Q5T653 305 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 NIPBLQ6KC79 2804 aaeCLIP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 C22orf39Q6P5X5 142 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 CEMP1Q6PRD7 247 aaPredicted RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 TMEM14EPQ6UXP3 125 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 AAED1Q7RTV5 226 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 WDR86Q86TI4 376 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 RPS19BP1Q86WX3 136 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC00471Q8N535 108 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 RNF182Q8N6D2 247 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 DEFB124Q8NES8 71 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 OR2A1Q8NGT9 310 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 PPP1R1CQ8WVI7 109 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 AQP3Q92482 292 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 LSM10Q969L4 123 aaKnown RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC25A44Q96H78 314 aaPredicted RBP2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 C2orf50Q96LR7 162 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC01587Q99440 93 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 SERP1Q9Y6X1 66 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 ATRQ13535 2644 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 STAB1Q9NY15 2570 aa2.04□□□□□ -2.08
HERPUD1-212ENST00000567944 ZFC3H1O60293 1989 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV1-2A0A0B4J238 106 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV1-1A0A0B4J248 108 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TRAV4A0A0B4J268 109 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TRBV7-6A0A0J9YX20 115 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF736B4DX44 427 aaPredicted RBP2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 LGALS9O00182 355 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 CCL16O15467 120 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 MT-ATP8P03928 68 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 CD3DP04234 171 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 GYPBP06028 91 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 IGHV1-8P0DP01 117 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 COX7CP15954 63 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 LGALS3P17931 250 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 ZNF138P52744 262 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 UBE2G1P62253 170 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 SNRPFP62306 86 aaKnown RBP2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 C12orf73Q69YU5 71 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 LAIR2Q6ISS4 152 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TMEM91Q6ZNR0 172 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 Q6ZRU5 148 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 LINC00305Q7Z4B0 112 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 HMGN2P46Q86SG4 172 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TEN1Q86WV5 123 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 PRR15Q8IV56 129 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 AMN1Q8IY45 258 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 SLC25A45Q8N413 288 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 APCDD1LQ8NCL9 501 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM213BQ8TBF2 198 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 LMX1AQ8TE12 382 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 FAM3DQ96BQ1 224 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 DPH3Q96FX2 82 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 PRELID3AQ96N28 172 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 METTL26Q96S19 204 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 TXNDC17Q9BRA2 123 aa2.03□□□□□ -2.08
HERPUD1-212ENST00000567944 AGPAT4-IT1Q9H0P7 198 aa2.03□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms