RNA–Protein interactions for RNA: ENST00000567722.5

CHRFAM7A-205, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best)

Gene CHRFAM7A, Length 689 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-205ENST00000567722 KRTAP10-2P60368 255 aa14□□□□□ -0.17
CHRFAM7A-205ENST00000567722 SLC25A29Q8N8R3 303 aa14□□□□□ -0.17
CHRFAM7A-205ENST00000567722 PTH2Q96A98 100 aa14□□□□□ -0.17
CHRFAM7A-205ENST00000567722 BOLA1Q9Y3E2 137 aa14□□□□□ -0.17
CHRFAM7A-205ENST00000567722 TRAV8-6A0A0B4J262 113 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 PGPEP1LA6NFU8 196 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 MGST1P10620 155 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 RNASE3P12724 160 aaKnown RBP13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 TIRAPP58753 221 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 LGALSLQ3ZCW2 172 aaPredicted RBP13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 CST9LP1Q5W188 147 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 DPPA3Q6W0C5 159 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 CYTL1Q9NRR1 136 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 TNFRSF18Q9Y5U5 241 aa13.99□□□□□ -0.17
CHRFAM7A-205ENST00000567722 LRP1BQ9NZR2 4599 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 RYR1P21817 5038 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 B4DEV8 164 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 SMLR1H3BR10 107 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 OR10J3Q5JRS4 329 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 FMC1Q96HJ9 113 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 TCEAL7Q9BRU2 100 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 ZFP30Q9Y2G7 519 aa13.98□□□□□ -0.17
CHRFAM7A-205ENST00000567722 IGKV3D-20A0A0C4DH25 116 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 IGHV3-38A0A0C4DH36 116 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 A8MWV9 139 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 ZNF345Q14585 488 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 MAPKAPK5-AS1Q8N8E1 139 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 PGPEP1Q9NXJ5 209 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 PCLOQ9Y6V0 5065 aa13.97□□□□□ -0.17
CHRFAM7A-205ENST00000567722 KCNRGQ8N5I3 272 aa13.96□□□□□ -0.17
CHRFAM7A-205ENST00000567722 SYT8Q8NBV8 401 aa13.96□□□□□ -0.17
CHRFAM7A-205ENST00000567722 M0R036 132 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 AKR1C3P42330 323 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 FHITP49789 147 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PIK3CD-AS1Q5SR53 167 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 FAM162BQ5T6X4 162 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 IL36BQ9NZH7 164 aa13.95□□□□□ -0.18
CHRFAM7A-205ENST00000567722 KANTRA0A1W2PQU2 76 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 H3BVH4 76 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PSCAO43653 123 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 LINC01556Q5JQF7 62 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 CDPF1Q6NVV7 123 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 ZFP2Q6ZN57 461 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 ATP6V0E2Q8NHE4 81 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 FAM213BQ8TBF2 198 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 ZC2HC1AQ96GY0 325 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 ZNF471Q9BX82 626 aaPredicted RBP13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PARLQ9H300 379 aa13.94□□□□□ -0.18
CHRFAM7A-205ENST00000567722 HSPG2P98160 4391 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 A0A0D9SG52 128 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 UMAD1C9J7I0 102 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 SH2D1AO60880 128 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 SEC11BP0C7V7 166 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 EIF5AP63241 154 aaKnown RBP13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 LELP1Q5T871 98 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 OR11H4Q8NGC9 324 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 SFT2D1Q8WV19 159 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GTSF1LQ9H1H1 148 aa13.93□□□□□ -0.18
CHRFAM7A-205ENST00000567722 A0A087WTM6 91 aa13.92□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PFDN1O60925 122 aa13.92□□□□□ -0.18
CHRFAM7A-205ENST00000567722 A0A1B0GV50 99 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 HMSDA8MTL9 139 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 KRBOX1C9JBD0 128 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 RHODO00212 210 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 BCL2L11O43521 198 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PAGE4O60829 102 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 TPT1P13693 172 aaKnown RBP13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 COX8CQ7Z4L0 72 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 PHLDA3Q9Y5J5 127 aa13.91□□□□□ -0.18
CHRFAM7A-205ENST00000567722 TRBV6-1A0A0K0K1D8 114 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GRIFINA4D1Z8 144 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GAGE12JA6NER3 117 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 ARMS2P0C7Q2 107 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GAGE1Q13065 139 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GAGE4Q13068 117 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GAGE5Q13069 117 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 GAGE13Q4V321 117 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 DNAH5Q8TE73 4624 aa13.9□□□□□ -0.18
CHRFAM7A-205ENST00000567722 TMSB15BA0A087X1C1 80 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 LTAP01374 205 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 IGHV3-30P01768 117 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 IGHV3-33P01772 117 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 IGHV3-30-3P0DP02 117 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 IGHV3-30-5P0DP03 117 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 CRIP1P50238 77 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 DNLZQ5SXM8 178 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 FAM74A4Q5TZK3 123 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 DMRTA1Q5VZB9 504 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 Q9HAA7 133 aa13.89□□□□□ -0.19
CHRFAM7A-205ENST00000567722 S100A9P06702 114 aaKnown RBP13.88□□□□□ -0.19
CHRFAM7A-205ENST00000567722 ZNF674Q2M3X9 581 aa13.88□□□□□ -0.19
CHRFAM7A-205ENST00000567722 MBD3L1Q8WWY6 194 aa13.88□□□□□ -0.19
CHRFAM7A-205ENST00000567722 JPT2Q9H910 190 aa13.88□□□□□ -0.19
CHRFAM7A-205ENST00000567722 IBA57-AS1B1ANH7 110 aa13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 M0R381 172 aa13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 H2AFB1P0C5Y9 115 aa13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 FUSP35637 526 aaKnown RBP eCLIP13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 LINC01559Q495D7 138 aa13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 Q6ZSN1 163 aa13.87□□□□□ -0.19
CHRFAM7A-205ENST00000567722 Q8N1X5 172 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms