RNA–Protein interactions for RNA: ENST00000567704.5

CSPG4P13-202, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

BASIC

Gene CSPG4P13, Length 4,801 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-202ENST00000567704 MED12LQ86YW9 2145 aa9.68□□□□□ -0.86
CSPG4P13-202ENST00000567704 Q6ZUT4 128 aa9.68□□□□□ -0.86
CSPG4P13-202ENST00000567704 SPG11Q96JI7 2443 aa9.68□□□□□ -0.86
CSPG4P13-202ENST00000567704 A0A0J9YXV3 536 aa9.68□□□□□ -0.86
CSPG4P13-202ENST00000567704 IGHV1-69DA0A0B4J2H0 117 aa9.68□□□□□ -0.86
CSPG4P13-202ENST00000567704 RHODO00212 210 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 INSP01308 110 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 RUSC1-AS1Q66K80 236 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 MBD6Q96DN6 1003 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 SPANXB1Q9NS25 103 aaPredicted RBP9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 E9PLD3 99 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 LHBP01229 141 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 ZNRF2Q8NHG8 242 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 BPESC1Q9GZL8 116 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 ATP6V0E2Q8NHE4 81 aa9.67□□□□□ -0.86
CSPG4P13-202ENST00000567704 RBAKDNA6NC62 111 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 PRAC2D3DTV9 90 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 UBE2E1P51965 193 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 INS-IGF2F8WCM5 200 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 TCTEX1D4Q5JR98 221 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 NXPH4O95158 308 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 C2CD3Q4AC94 2353 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 NDUFA4O00483 81 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 RPL39P62891 51 aaKnown RBP9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 ZFP2Q6ZN57 461 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 XCL2Q9UBD3 114 aa9.66□□□□□ -0.86
CSPG4P13-202ENST00000567704 ACYP1P07311 99 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 PRSS33Q8NF86 280 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 BAALCQ8WXS3 180 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 KAAG1Q9UBP8 84 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 ICOSQ9Y6W8 199 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 HERV-K104P63124 156 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 MRPL23Q16540 153 aaKnown RBP9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 Q9H8V8 135 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 C11orf86A6NJI1 115 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 C8orf31Q8N9H6 132 aa9.65□□□□□ -0.86
CSPG4P13-202ENST00000567704 RHOHQ15669 191 aa9.65□□□□□ -0.87
CSPG4P13-202ENST00000567704 DPH3Q96FX2 82 aa9.65□□□□□ -0.87
CSPG4P13-202ENST00000567704 TRAV13-2A0A0B4J235 113 aa9.64□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGKV1D-37A0A075B6S9 117 aa9.64□□□□□ -0.87
CSPG4P13-202ENST00000567704 TCL1BO95988 128 aa9.64□□□□□ -0.87
CSPG4P13-202ENST00000567704 MLST8Q9BVC4 326 aa9.64□□□□□ -0.87
CSPG4P13-202ENST00000567704 LINC00310P59036 64 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 LENEPQ9Y5L5 61 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 FAM215AQ9Y5M1 114 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 CTSGP08311 255 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 RPL35AP18077 110 aaKnown RBP9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 RBMY1FQ15415 496 aaKnown RBP9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGKV3D-7A0A0C4DH55 119 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGKV2-29A2NJV5 120 aaPredicted RBP9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 SUMO4Q6EEV6 95 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGKV2D-26A0A0A0MRZ7 120 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 SS18Q15532 418 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 NDUFA11Q86Y39 141 aa9.63□□□□□ -0.87
CSPG4P13-202ENST00000567704 TRBV10-2A0A0K0K1G8 114 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 CFHR3Q02985 330 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 MRAPQ8TCY5 172 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 A0A1B0GX51 115 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 HERVK_113P63121 156 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 HOXD3P31249 432 aaPredicted RBP9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 DAND5Q8N907 189 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 TOMM6Q96B49 74 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGLV2-23P01705 113 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 RBM3P98179 157 aaKnown RBP9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 MRPL53Q96EL3 112 aaKnown RBP9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 TM2D2Q9BX73 214 aa9.62□□□□□ -0.87
CSPG4P13-202ENST00000567704 CRLF1O75462 422 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 C2orf91Q6ZV80 131 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 CLEC2BQ92478 149 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 CITED2Q99967 270 aaPredicted RBP9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGLV11-55A0A075B6I3 123 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 DEFB130BP0DP73 79 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 DEFB130AP0DP74 79 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 NDUFV3P56181 108 aaKnown RBP9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 NUP210Q8TEM1 1887 aaPredicted RBP9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 J3KT08 172 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 BUB3O43684 328 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 PTPRQQ9UMZ3 2332 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 IGHV7-4-1A0A0J9YVY3 117 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 SPANXCQ9NY87 97 aa9.61□□□□□ -0.87
CSPG4P13-202ENST00000567704 ADAMTS9Q9P2N4 1935 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 TEX22C9J3V5 150 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 ZNF106Q9H2Y7 1883 aaKnown RBP9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 A0A0B4J2C4 111 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 C1orf43Q9BWL3 253 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 TRBV6-1A0A0K0K1D8 114 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 CRYGCP07315 174 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 PRR30Q53SZ7 412 aaPredicted RBP9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 TMEM243Q9BU79 118 aa9.6□□□□□ -0.87
CSPG4P13-202ENST00000567704 WI2-2373I1.2A0A1W2PRP0 233 aa9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 ZNF80P51504 273 aaPredicted RBP9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 Q8N1Y9 231 aa9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 ATOX1O00244 68 aa9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 SRSF2Q01130 221 aaKnown RBP9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 MAPKAPK5-AS1Q8N8E1 139 aa9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 BDP1A6H8Y1 2624 aa9.59□□□□□ -0.87
CSPG4P13-202ENST00000567704 Q8N976 141 aa9.58□□□□□ -0.88
CSPG4P13-202ENST00000567704 PIFOQ8TCI5 191 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms