RNA–Protein interactions for RNA: ENST00000567698.1

SHCBP1-206, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 2

Gene SHCBP1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-206ENST00000567698 ROBO1Q9Y6N7 1651 aa1.42□□□□□ -2.18
SHCBP1-206ENST00000567698 PTPRDP23468 1912 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 MCRIP1C9JLW8 97 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 KLF7O75840 302 aaPredicted RBP1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 TNFP01375 233 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 PRB4P10163 310 aaPredicted RBP1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 COA5Q86WW8 74 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 NAA60Q9H7X0 242 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 SERP1Q9Y6X1 66 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 KTN1Q86UP2 1357 aaKnown RBP1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 PTPRMP28827 1452 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 CTTNBP2Q8WZ74 1663 aa1.41□□□□□ -2.18
SHCBP1-206ENST00000567698 CPSF1Q10570 1443 aaKnown RBP1.4□□□□□ -2.18
SHCBP1-206ENST00000567698 TNRC6AQ8NDV7 1962 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 TRBV6-5A0A0K0K1A5 114 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 SMIM31A0A1B0GVY4 71 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 GEMIN2O14893 280 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 IGHV3-33P01772 117 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 PIRTP0C851 137 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 TPPP2P59282 170 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 Q56UQ5 140 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 Q6AWC8 147 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 OR2T2Q6IF00 324 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 CSAG1Q6PB30 78 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 LINC00299Q6ZSB3 139 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 OR10AG1Q8NH19 301 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 DYNLRB2Q8TF09 96 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 MRPL57Q9BQC6 102 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 LIMD2Q9BT23 127 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 REG4Q9BYZ8 158 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 FAIMQ9NVQ4 179 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 IER3IP1Q9Y5U9 82 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 MED12LQ86YW9 2145 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 TNRC6BQ9UPQ9 1833 aaKnown RBP1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 MED13Q9UHV7 2174 aa1.4□□□□□ -2.19
SHCBP1-206ENST00000567698 LAMB1P07942 1786 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 BRWD1Q9NSI6 2320 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 GAPVD1Q14C86 1478 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 OOSP1A8MZH6 123 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 F8W1H4 67 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 IGKCP01834 107 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 TFF1P04155 84 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 COX7CP15954 63 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 HSD52Q0P140 79 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 MRPL54Q6P161 138 aaKnown RBP1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 C10orf105Q8TEF2 133 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 SPANXDQ9BXN6 97 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 RPRMQ9NS64 109 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 TMEM242Q9NWH2 141 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 ORMDL1Q9P0S3 153 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 NDUFA12Q9UI09 145 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 PRDM2Q13029 1718 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 ZNF609O15014 1411 aa1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 TROQ12816 1431 aaPredicted RBP1.39□□□□□ -2.19
SHCBP1-206ENST00000567698 TTC37Q6PGP7 1564 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 POLA1P09884 1462 aaPredicted RBP1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 CCDC141Q6ZP82 1450 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 TRAV30A0A087WSZ9 112 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 CXorf51AA0A1B0GTR3 108 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 TRBV6-4A0A1B0GX49 114 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 A0A1W2PRS3 328 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 TMEM218A2RU14 115 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 IL5P05113 134 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 SLC25A6P12236 298 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 NCMAPQ5T1S8 102 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 C6orf52Q5T4I8 152 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 ZNF431Q8TF32 576 aaPredicted RBP1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 LINC00526Q96FQ7 95 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 DSCR8Q96T75 97 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 CDC42SE1Q9NRR8 79 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 FREM1Q5H8C1 2179 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 NRKQ7Z2Y5 1582 aa1.38□□□□□ -2.19
SHCBP1-206ENST00000567698 ABCC10Q5T3U5 1492 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 CCDC18Q5T9S5 1454 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 CITO14578 2027 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 AKAP12Q02952 1782 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 MYOFQ9NZM1 2061 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 TRAV17A0A0B4J275 112 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 NDUFB6O95139 128 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 IFNA17P01571 189 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 IL7P13232 177 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 RHOHQ15669 191 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 SPRNQ5BIV9 151 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 C9orf153Q5TBE3 101 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 LYPD5Q6UWN5 251 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 ACBD7Q8N6N7 88 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 Q8N8P6 123 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 ZNF563Q8TA94 476 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 TSKUQ8WUA8 353 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 C4orf3Q8WVX3 66 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 SPTSSAQ969W0 71 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 ODF3Q96PU9 254 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 NSD3Q9BZ95 1437 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 CASP8AP2Q9UKL3 1982 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 IFT140Q96RY7 1462 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 RAPGEF2Q9Y4G8 1499 aa1.37□□□□□ -2.19
SHCBP1-206ENST00000567698 RBBP6Q7Z6E9 1792 aaKnown RBP1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 RTTNQ86VV8 2226 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 EXPH5Q8NEV8 1989 aa1.36□□□□□ -2.19
SHCBP1-206ENST00000567698 TRAV2A0A0B4J234 112 aa1.36□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms