RNA–Protein interactions for RNA: ENST00000566612.5

CDH1-210, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 4,138 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-210ENST00000566612 VCYO14598 125 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 FSTL3O95633 263 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 GATA3P23771 443 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 C16orf54Q6UWD8 224 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 CHAC1Q9BUX1 264 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 SMIM2Q9BVW6 85 aa8.91□□□□□ -0.98
CDH1-210ENST00000566612 TNRC18O15417 2968 aaPredicted RBP8.91□□□□□ -0.98
CDH1-210ENST00000566612 ZNF48Q96MX3 618 aaPredicted RBP8.9□□□□□ -0.98
CDH1-210ENST00000566612 CFAP47Q6ZTR5 3102 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 HOXA3O43365 443 aaPredicted RBP8.9□□□□□ -0.98
CDH1-210ENST00000566612 PAPPA-AS1Q5QFB9 102 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 STHQ8IWL8 128 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 MRAP2Q96G30 205 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 RBAKDNA6NC62 111 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 IGF1P05019 195 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 PLNP26678 52 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 MRGPRG-AS1Q2M3A8 158 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 LINC01545Q5VT33 79 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 ZNF418Q8TF45 676 aaPredicted RBP8.9□□□□□ -0.98
CDH1-210ENST00000566612 RPL39LQ96EH5 51 aaKnown RBP8.9□□□□□ -0.98
CDH1-210ENST00000566612 Q96MF0 132 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 TP53TG1Q9Y2A0 90 aa8.9□□□□□ -0.98
CDH1-210ENST00000566612 EBI3Q14213 229 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 MEGF9Q9H1U4 602 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 TRGV11A0A075B6L2 103 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 COTL1Q14019 142 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 LINC01559Q495D7 138 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 FN1P02751 2386 aaKnown RBP8.89□□□□□ -0.99
CDH1-210ENST00000566612 TRBV6-1A0A0K0K1D8 114 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 SDHAF1A6NFY7 115 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 ZNF479Q96JC4 524 aa8.89□□□□□ -0.99
CDH1-210ENST00000566612 ADGRG4Q8IZF6 3080 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 GAGE12BA1L429 117 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 IGHV3-53P01767 116 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 CD28P10747 220 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 CTRLP40313 264 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 ACANP16112 2415 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 A0A1B0GWB2 263 aa8.88□□□□□ -0.99
CDH1-210ENST00000566612 A0A0U1RRA0 63 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 IGHG2P01859 326 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 UBE2L6O14933 153 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 CDKN1BP46527 198 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 Q8N6K4 173 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 PHLDA1Q8WV24 401 aaPredicted RBP8.87□□□□□ -0.99
CDH1-210ENST00000566612 ZFAND3Q9H8U3 227 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 TRGV2A0A075B6R0 118 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 TRAV2A0A0B4J234 112 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 PAX2Q02962 417 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 DOPEY1Q5JWR5 2465 aa8.87□□□□□ -0.99
CDH1-210ENST00000566612 K7EMI3 77 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 MRPL53Q96EL3 112 aaKnown RBP8.86□□□□□ -0.99
CDH1-210ENST00000566612 PRORYQ9H606 182 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 IGHV1OR15-1A0A075B7D0 117 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 IGHV3-16A0A0C4DH30 117 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 HOXD3P31249 432 aaPredicted RBP8.86□□□□□ -0.99
CDH1-210ENST00000566612 NSUN5P1Q3KNT7 163 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 SCRT2Q9NQ03 307 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 DMXL2Q8TDJ6 3036 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 CCL25O15444 150 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 PF4P02776 101 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 C9orf47Q6ZRZ4 202 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 TEX29Q8N6K0 151 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 K7ERJ3 54 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 ZNF493Q6ZR52 646 aa8.86□□□□□ -0.99
CDH1-210ENST00000566612 CIDEAO60543 219 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 RIPPLY3P57055 190 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 LENEPQ9Y5L5 61 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 TRGV1A0A0A0MS02 117 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 H3BUA1 57 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 SAP30O75446 220 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 MTURNQ8N3F0 131 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 F8VRH5 84 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 C19orf54Q5BKX5 351 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 Q6ZS46 218 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 JPT2Q9H910 190 aa8.85□□□□□ -0.99
CDH1-210ENST00000566612 MEIG1Q5JSS6 88 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 C10orf99Q6UWK7 81 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 Q6ZQT7 251 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 SPATA12Q7Z6I5 190 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 VPREB3Q9UKI3 123 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 IGLC6P0CF74 106 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 SLURP1P55000 103 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 GAGE1Q13065 139 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 SPXQ9BT56 116 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 GAS8-AS1O95177 125 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 NPC2P61916 151 aa8.84□□□□□ -0.99
CDH1-210ENST00000566612 ANKRD17O75179 2603 aaKnown RBP8.84□□□□□ -0.99
CDH1-210ENST00000566612 PTPRBP23467 1997 aa8.84□□□□□ -1
CDH1-210ENST00000566612 A6NDX4 124 aa8.83□□□□□ -1
CDH1-210ENST00000566612 RPL35AP18077 110 aaKnown RBP8.83□□□□□ -1
CDH1-210ENST00000566612 URB1-AS1Q96HZ7 61 aa8.83□□□□□ -1
CDH1-210ENST00000566612 C20orf173Q96LM9 149 aa8.83□□□□□ -1
CDH1-210ENST00000566612 PRADC1Q9BSG0 188 aa8.83□□□□□ -1
CDH1-210ENST00000566612 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
CDH1-210ENST00000566612 F8W735 103 aaPredicted RBP8.83□□□□□ -1
CDH1-210ENST00000566612 DEFB125Q8N687 156 aa8.83□□□□□ -1
CDH1-210ENST00000566612 ATMQ13315 3056 aa8.83□□□□□ -1
CDH1-210ENST00000566612 A0A087WX48 190 aa8.82□□□□□ -1
CDH1-210ENST00000566612 IGHV3-38A0A0C4DH36 116 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms