RNA–Protein interactions for RNA: ENST00000566009.5

SMPD3-206, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 4

Gene SMPD3, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-206ENST00000566009 MT-ND6P03923 174 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 OR5G3P0C626 314 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 DEFA1P59665 94 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 DEFA3P59666 94 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 MIAQ16674 131 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 C1orf137Q5JT78 98 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 MITD1Q8WV92 249 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 C9orf85Q96MD7 179 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 GSKIPQ9P0R6 139 aa5.26□□□□□ -1.57
SMPD3-206ENST00000566009 PRSS46E5RG02 174 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 M0R2T5 61 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 HYPMO75409 117 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 MGST1P10620 155 aaKnown RBP5.25□□□□□ -1.57
SMPD3-206ENST00000566009 IAH1Q2TAA2 248 aaPredicted RBP5.25□□□□□ -1.57
SMPD3-206ENST00000566009 CFAP126Q5VTH2 177 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 ARL6IP6Q8N6S5 226 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 SAT2Q96F10 170 aaPredicted RBP5.25□□□□□ -1.57
SMPD3-206ENST00000566009 NPVFQ9HCQ7 196 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 Q9UF83 564 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 PXMP4Q9Y6I8 212 aa5.25□□□□□ -1.57
SMPD3-206ENST00000566009 TRGV11A0A075B6L2 103 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 TRAV6A0A075B6T7 132 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 TMEM262E9PQX1 116 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 H3BP45 60 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 SCGB1D2O95969 90 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 ANGP03950 147 aaKnown RBP5.24□□□□□ -1.57
SMPD3-206ENST00000566009 IL5P05113 134 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 H2AFB2P0C5Z0 115 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 NKX2-5P52952 324 aaPredicted RBP5.24□□□□□ -1.57
SMPD3-206ENST00000566009 TAS2R30P59541 319 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 AKR1C1Q04828 323 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 MZT2BQ6NZ67 158 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 MRPL53Q96EL3 112 aaKnown RBP5.24□□□□□ -1.57
SMPD3-206ENST00000566009 ALG5Q9Y673 324 aa5.24□□□□□ -1.57
SMPD3-206ENST00000566009 FAM240BA0A1B0GVZ2 78 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 SMCO3A2RU48 225 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 FAM25EA8MYX2 175 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 FNDC10F2Z333 226 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 L7N2F9 121 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 SSSCA1O60232 199 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 TSC22D2O75157 780 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 MBPP02686 304 aaPredicted RBP5.23□□□□□ -1.57
SMPD3-206ENST00000566009 IGLV7-43P04211 117 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 METTL15P1P0C7V9 234 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 RPS10P46783 165 aaKnown RBP5.23□□□□□ -1.57
SMPD3-206ENST00000566009 SELENOTP62341 195 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 VAMP2P63027 116 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 IFITM2Q01629 132 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 TMEM14EPQ6UXP3 125 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 CYP2G1PQ6ZSU1 146 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 AKAP14Q86UN6 197 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 C12orf45Q8N5I9 185 aaPredicted RBP5.23□□□□□ -1.57
SMPD3-206ENST00000566009 MARVELD1Q9BSK0 173 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 SAMD10Q9BYL1 202 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 GFRA4Q9GZZ7 299 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 LINC00474Q9P2X8 69 aa5.23□□□□□ -1.57
SMPD3-206ENST00000566009 C7orf66A4D0T2 115 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 H3BQ15 152 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 M0R3E3 92 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 GOSR2O14653 212 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 GNRH2O43555 120 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 PLP1P60201 277 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 SEC61BP60468 96 aaKnown RBP5.22□□□□□ -1.57
SMPD3-206ENST00000566009 RRAS2P62070 204 aaPredicted RBP5.22□□□□□ -1.57
SMPD3-206ENST00000566009 FAM159AQ6UWV7 190 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 S100A7AQ86SG5 101 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 ZNF546Q86UE3 836 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 ENKURQ8TC29 256 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 SEC22CQ9BRL7 303 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 GGACTQ9BVM4 153 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 NUDT15Q9NV35 164 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 MGAT4CQ9UBM8 478 aa5.22□□□□□ -1.57
SMPD3-206ENST00000566009 CARHSP1Q9Y2V2 147 aaKnown RBP5.22□□□□□ -1.57
SMPD3-206ENST00000566009 INMT-MINDY4F8WBC2 141 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 K7EPK0 472 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 PVALBP20472 110 aaPredicted RBP5.21□□□□□ -1.58
SMPD3-206ENST00000566009 ARL16Q0P5N6 197 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 MPV17L2Q567V2 206 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 Q5BKY6 102 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 CLPSL2Q6UWE3 100 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 PATE2Q6UY27 113 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 BPIFA4PQ86YQ2 179 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 ARL6Q9H0F7 186 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 PPDPFQ9H3Y8 114 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 RNF24Q9Y225 148 aa5.21□□□□□ -1.58
SMPD3-206ENST00000566009 LSM5Q9Y4Y9 91 aaKnown RBP5.21□□□□□ -1.58
SMPD3-206ENST00000566009 A0A087WWL8 130 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 FAM24AA6NFZ4 105 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 AGPAT2O15120 278 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 LINC00869P0C866 280 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 IGLC2P0DOY2 106 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 FGF8P55075 233 aaPredicted RBP5.2□□□□□ -1.58
SMPD3-206ENST00000566009 CYCSP99999 105 aaKnown RBP5.2□□□□□ -1.58
SMPD3-206ENST00000566009 IL15RAQ13261 267 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 ZNF876PQ49A33 203 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 PXDC1Q5TGL8 231 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 SSBP4Q9BWG4 385 aaPredicted RBP5.2□□□□□ -1.58
SMPD3-206ENST00000566009 ARV1Q9H2C2 271 aa5.2□□□□□ -1.58
SMPD3-206ENST00000566009 GPN1Q9HCN4 374 aaPredicted RBP5.2□□□□□ -1.58
SMPD3-206ENST00000566009 PRR34Q9NV39 138 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms