RNA–Protein interactions for RNA: ENST00000565887.1

SHCBP1-204, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 5

Gene SHCBP1, Length 603 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-204ENST00000565887 A8MWV9 139 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 LY6G6CO95867 125 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 IGLV2-8P01709 118 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 ARMS2P0C7Q2 107 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 RNF212Q495C1 297 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 PHLDA3Q9Y5J5 127 aa8.84□□□□□ -0.99
SHCBP1-204ENST00000565887 MUC4Q99102 2169 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 TRAV26-1A0A087WT03 109 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 C19orf71A6NCJ1 209 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 PAX4O43316 350 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 P01737 135 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 HOXA5P20719 270 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 FAM3BP58499 235 aaPredicted RBP8.83□□□□□ -1
SHCBP1-204ENST00000565887 FHL2Q14192 279 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 SCRT2Q9NQ03 307 aa8.83□□□□□ -1
SHCBP1-204ENST00000565887 STARD9Q9P2P6 4700 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 TRBV20OR9-2A0A075B6H5 130 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 GRIFINA4D1Z8 144 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 PGPEP1LA6NFU8 196 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 ZNF727A8MUV8 499 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 RS1O15537 224 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 NUDT3O95989 172 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 SRP19P09132 144 aaKnown RBP8.82□□□□□ -1
SHCBP1-204ENST00000565887 ZFP2Q6ZN57 461 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 ZFP82Q8N141 532 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 OCC1Q8TAD7 63 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 SMIM7Q9BQ49 75 aa8.82□□□□□ -1
SHCBP1-204ENST00000565887 SSBP4Q9BWG4 385 aaPredicted RBP8.82□□□□□ -1
SHCBP1-204ENST00000565887 TMSB15BA0A087X1C1 80 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 A0A1W2PPQ1 181 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 F2Z2F3 143 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 H3BVH4 76 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 IGHV3-53P01767 116 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 OR5AL1P0C617 328 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 CEBPGP53567 150 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 CRYBA4P53673 196 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 CCL18P55774 89 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 MRPL23Q16540 153 aaKnown RBP8.81□□□□□ -1
SHCBP1-204ENST00000565887 CFAP126Q5VTH2 177 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 SH2D6Q7Z4S9 175 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 ZNF575Q86XF7 245 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 POM121L12Q8N7R1 296 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 OR2D3Q8NGH3 330 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 ZNF479Q96JC4 524 aa8.81□□□□□ -1
SHCBP1-204ENST00000565887 DYNC2H1Q8NCM8 4307 aaKnown RBP8.8□□□□□ -1
SHCBP1-204ENST00000565887 RHODO00212 210 aa8.8□□□□□ -1
SHCBP1-204ENST00000565887 SNAI2O43623 268 aa8.8□□□□□ -1
SHCBP1-204ENST00000565887 DMRTA1Q5VZB9 504 aa8.8□□□□□ -1
SHCBP1-204ENST00000565887 UBE2DNLQ8IWF7 75 aa8.8□□□□□ -1
SHCBP1-204ENST00000565887 PCNPQ8WW12 178 aaKnown RBP8.8□□□□□ -1
SHCBP1-204ENST00000565887 ICOSQ9Y6W8 199 aa8.8□□□□□ -1
SHCBP1-204ENST00000565887 A0A0J9YY99 117 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 TRBV6-4A0A1B0GX49 114 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 SFTA3P0C7M3 94 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 TMEM241Q24JQ0 296 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 CLLU1Q5K131 121 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 WDR73Q6P4I2 378 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 FAM231DQ6ZW35 169 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 NUDT10Q8NFP7 164 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 NUDT11Q96G61 164 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 SFRP2Q96HF1 295 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 VSIG2Q96IQ7 327 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 PRADC1Q9BSG0 188 aa8.79□□□□□ -1
SHCBP1-204ENST00000565887 GATA1P15976 413 aaPredicted RBP8.78□□□□□ -1
SHCBP1-204ENST00000565887 CACNG7P62955 275 aa8.78□□□□□ -1
SHCBP1-204ENST00000565887 RPL19P84098 196 aaKnown RBP8.78□□□□□ -1
SHCBP1-204ENST00000565887 SOHLH1Q5JUK2 328 aa8.78□□□□□ -1
SHCBP1-204ENST00000565887 SPANXN1Q5VSR9 72 aa8.78□□□□□ -1
SHCBP1-204ENST00000565887 RPP21Q9H633 154 aaKnown RBP8.78□□□□□ -1
SHCBP1-204ENST00000565887 A8MWL6 223 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 K7EN84 100 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 M0R381 172 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 NXPH4O95158 308 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 ERVFC1-1P60608 527 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 RHOHQ15669 191 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 NEGR1Q7Z3B1 354 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 C15orf54Q8N8G6 183 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 FER1L6-AS1Q8NA97 138 aa8.77□□□□□ -1.01
SHCBP1-204ENST00000565887 A0A096LPF7 62 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 GATCO43716 136 aaKnown RBP8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 IGLC6P0CF74 106 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 CT83Q5H943 113 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 LINC01551Q86U37 167 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 RNASE7Q9H1E1 156 aaKnown RBP8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 OSTCQ9NRP0 149 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 NAT8Q9UHE5 227 aa8.76□□□□□ -1.01
SHCBP1-204ENST00000565887 LYSTQ99698 3801 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 FAM231BA6NCW3 169 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 SMIM17P0DL12 118 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 GYPEP15421 78 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 SRIP30626 198 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 SLC25A29Q8N8R3 303 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 NACAE9PAV3 2078 aa8.75□□□□□ -1.01
SHCBP1-204ENST00000565887 C9JQL5 133 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 K7EQD1 137 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 CRYGDP07320 174 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 FOXA3P55318 350 aaPredicted RBP8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 RAB4BP61018 213 aa8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 SRSF3P84103 164 aaKnown RBP8.74□□□□□ -1.01
SHCBP1-204ENST00000565887 IFITM2Q01629 132 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms