RNA–Protein interactions for RNA: ENST00000565038.1

PALB2-203, Transcript of partner and localizer of BRCA2, humanhuman

TSL 3

Gene PALB2, Length 344 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-203ENST00000565038 DEFB121Q5J5C9 76 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 GLYATL3Q5SZD4 288 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 LINC01590Q5TEZ4 76 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 AADACL3Q5VUY0 350 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 TMEM42Q69YG0 159 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 BPIFA4PQ86YQ2 179 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 FAM216BQ8N7L0 139 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 ZNF565Q8N9K5 539 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 OR9Q1Q8NGQ5 310 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 MCFD2Q8NI22 146 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 GNPDA2Q8TDQ7 276 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 ZNF418Q8TF45 676 aaPredicted RBP1.02□□□□□ -2.25
PALB2-203ENST00000565038 DNAJC9Q8WXX5 260 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 GINS4Q9BRT9 223 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 COMMD5Q9GZQ3 224 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 C8orf4Q9NR00 106 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 FAIMQ9NVQ4 179 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 CALML5Q9NZT1 146 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 SLC22A13Q9Y226 551 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 MED31Q9Y3C7 131 aa1.02□□□□□ -2.25
PALB2-203ENST00000565038 COL7A1Q02388 2944 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 CLPSL1A2RUU4 121 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 ZNF705FA8MVS1 300 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 IQCF6A8MYZ5 107 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 ZNF736B4DX44 427 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 CLDN25C9JDP6 229 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 K7EIL1 84 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 CRPP02741 224 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 PRM2P04554 102 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 CCL3L1P16619 93 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 SPI1P17947 270 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 PPIBP23284 216 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BOP23527 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BBP33778 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 RPL5P46777 297 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BDP58876 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 RPS20P60866 119 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 LSM6P62312 80 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BCP62807 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 FADDQ13158 208 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 KRR1Q13601 381 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 DIAPH2-AS1Q14236 149 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 MOGQ16653 247 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST2H2BEQ16778 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST2H2BFQ5QNW6 126 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 LPCAT3Q6P1A2 487 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HAGHLQ6PII5 290 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 C7orf65Q6ZTY9 151 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 VMO1Q7Z5L0 202 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 COA5Q86WW8 74 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 CLVS1Q8IUQ0 354 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 C10orf126Q8N4M7 172 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 RPP25LQ8N5L8 163 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 OR10AC1Q8NH08 325 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 MRPL30Q8TCC3 161 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 SPACA4Q8TDM5 124 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 THEM6Q8WUY1 208 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 DYDC1Q8WWB3 177 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BHQ93079 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 LEAP2Q969E1 77 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 POP5Q969H6 163 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 SLAMF6Q96DU3 332 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 GAFA1Q96PS6 74 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BNQ99877 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HIST1H2BMQ99879 126 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 NIPSNAP1Q9BPW8 284 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 HOPXQ9BPY8 73 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 TTTY10Q9BZA0 68 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 FAM107BQ9H098 131 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 C11orf68Q9H3H3 251 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 CTNNBIP1Q9NSA3 81 aaPredicted RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 C19orf12Q9NSK7 152 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 ARMC1Q9NVT9 282 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 GID8Q9NWU2 228 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 TVP23BQ9NYZ1 205 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 DOK5Q9P104 306 aa1.01□□□□□ -2.25
PALB2-203ENST00000565038 RSL24D1Q9UHA3 163 aaKnown RBP1.01□□□□□ -2.25
PALB2-203ENST00000565038 EXPH5Q8NEV8 1989 aa1□□□□□ -2.25
PALB2-203ENST00000565038 IGKV1-9A0A0C4DH69 117 aa1□□□□□ -2.25
PALB2-203ENST00000565038 FAM236DA0A1B0GTK5 79 aa1□□□□□ -2.25
PALB2-203ENST00000565038 MEIS3P1A6NDR6 274 aa1□□□□□ -2.25
PALB2-203ENST00000565038 OR4C46A6NHA9 309 aa1□□□□□ -2.25
PALB2-203ENST00000565038 FABP5P3A8MUU1 101 aa1□□□□□ -2.25
PALB2-203ENST00000565038 H3BUX3 64 aa1□□□□□ -2.25
PALB2-203ENST00000565038 M0R135 149 aa1□□□□□ -2.25
PALB2-203ENST00000565038 NPFFO15130 113 aa1□□□□□ -2.25
PALB2-203ENST00000565038 NDUFB3O43676 98 aa1□□□□□ -2.25
PALB2-203ENST00000565038 ZNF737O75373 536 aa1□□□□□ -2.25
PALB2-203ENST00000565038 GADD45GO95257 159 aa1□□□□□ -2.25
PALB2-203ENST00000565038 CNIH1O95406 144 aa1□□□□□ -2.25
PALB2-203ENST00000565038 IGF2P01344 180 aa1□□□□□ -2.25
PALB2-203ENST00000565038 TCRBP04435 133 aa1□□□□□ -2.25
PALB2-203ENST00000565038 UBBP0CG47 229 aa1□□□□□ -2.25
PALB2-203ENST00000565038 FAM236CP0DP71 79 aa1□□□□□ -2.25
PALB2-203ENST00000565038 PIPP12273 146 aaPredicted RBP1□□□□□ -2.25
PALB2-203ENST00000565038 GUCA1AP43080 201 aaPredicted RBP1□□□□□ -2.25
PALB2-203ENST00000565038 SRP9P49458 86 aaKnown RBP1□□□□□ -2.25
PALB2-203ENST00000565038 PCBD1P61457 104 aa1□□□□□ -2.25
PALB2-203ENST00000565038 NCALDP61601 193 aa1□□□□□ -2.25
PALB2-203ENST00000565038 GNGT1P63211 74 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms