RNA–Protein interactions for RNA: ENST00000564846.1

CLN6-205, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 1,762 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-205ENST00000564846 ORMDL3Q8N138 153 aa14.39□□□□□ -0.11
CLN6-205ENST00000564846 RAB4AP20338 218 aa14.39□□□□□ -0.11
CLN6-205ENST00000564846 TRPT1Q86TN4 253 aaKnown RBP14.39□□□□□ -0.11
CLN6-205ENST00000564846 RNF185Q96GF1 192 aa14.39□□□□□ -0.11
CLN6-205ENST00000564846 C20orf144Q9BQM9 153 aa14.39□□□□□ -0.11
CLN6-205ENST00000564846 IGHV3-16A0A0C4DH30 117 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 D6R8Y8 96 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 M0R381 172 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 PPBPP02775 128 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 EVI2AP22794 236 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 LINC00518Q8N0U6 118 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 Q8N1Y9 231 aa14.38□□□□□ -0.11
CLN6-205ENST00000564846 NIPBLQ6KC79 2804 aaeCLIP14.37□□□□□ -0.11
CLN6-205ENST00000564846 TRGV11A0A075B6L2 103 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 NXPH4O95158 308 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 SMIM6P0DI80 62 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 CKS2P33552 79 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 C9orf66Q5T8R8 295 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 SAMD10Q9BYL1 202 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 INSP01308 110 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 RBMY1A1P0DJD3 496 aaKnown RBP14.37□□□□□ -0.11
CLN6-205ENST00000564846 RBMY1CP0DJD4 496 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 NUTF2P61970 127 aaKnown RBP14.37□□□□□ -0.11
CLN6-205ENST00000564846 RBMY1FQ15415 496 aaKnown RBP14.37□□□□□ -0.11
CLN6-205ENST00000564846 PRELID3AQ96N28 172 aa14.37□□□□□ -0.11
CLN6-205ENST00000564846 JMJD1CQ15652 2540 aa14.36□□□□□ -0.11
CLN6-205ENST00000564846 NIT1Q86X76 327 aa14.36□□□□□ -0.11
CLN6-205ENST00000564846 C9orf85Q96MD7 179 aa14.36□□□□□ -0.11
CLN6-205ENST00000564846 C19orf73Q9NVV2 129 aa14.36□□□□□ -0.11
CLN6-205ENST00000564846 KRTAP24-1Q3LI83 254 aa14.35□□□□□ -0.11
CLN6-205ENST00000564846 CHCHD1Q96BP2 118 aaKnown RBP14.35□□□□□ -0.11
CLN6-205ENST00000564846 MDFICQ9P1T7 246 aa14.35□□□□□ -0.11
CLN6-205ENST00000564846 CBY3A6NI87 242 aa14.34□□□□□ -0.11
CLN6-205ENST00000564846 LINC00467Q9BRT7 94 aa14.34□□□□□ -0.11
CLN6-205ENST00000564846 LAMTOR2Q9Y2Q5 125 aa14.34□□□□□ -0.11
CLN6-205ENST00000564846 HSBP1O75506 76 aa14.34□□□□□ -0.11
CLN6-205ENST00000564846 RNASEKQ6P5S7 137 aaKnown RBP14.34□□□□□ -0.11
CLN6-205ENST00000564846 AP1S3Q96PC3 154 aa14.34□□□□□ -0.11
CLN6-205ENST00000564846 MCRIP2Q9BUT9 160 aaKnown RBP14.34□□□□□ -0.11
CLN6-205ENST00000564846 SPRY2O43597 315 aa14.33□□□□□ -0.12
CLN6-205ENST00000564846 LINC00614P0C842 121 aa14.33□□□□□ -0.12
CLN6-205ENST00000564846 AMTP48728 403 aa14.33□□□□□ -0.12
CLN6-205ENST00000564846 URB1-AS1Q96HZ7 61 aa14.33□□□□□ -0.12
CLN6-205ENST00000564846 DPH3P1Q9H4G8 78 aa14.33□□□□□ -0.12
CLN6-205ENST00000564846 SYT8Q8NBV8 401 aa14.32□□□□□ -0.12
CLN6-205ENST00000564846 C12orf57Q99622 126 aa14.32□□□□□ -0.12
CLN6-205ENST00000564846 SMKR1H3BMG3 65 aa14.32□□□□□ -0.12
CLN6-205ENST00000564846 PMCHP20382 165 aa14.32□□□□□ -0.12
CLN6-205ENST00000564846 NCR2O95944 276 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 WFDC9Q8NEX5 89 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 SPATA3Q8NHX4 192 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 MRAP2Q96G30 205 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 LINC01587Q99440 93 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 ZNF747Q9BV97 191 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 XCL2Q9UBD3 114 aa14.31□□□□□ -0.12
CLN6-205ENST00000564846 PYY3Q5JQD4 70 aa14.3□□□□□ -0.12
CLN6-205ENST00000564846 C14orf178Q8N769 122 aaPredicted RBP14.3□□□□□ -0.12
CLN6-205ENST00000564846 PRSS3P2Q8NHM4 247 aa14.3□□□□□ -0.12
CLN6-205ENST00000564846 WFDC10AQ9H1F0 79 aa14.3□□□□□ -0.12
CLN6-205ENST00000564846 TEP1Q99973 2627 aaKnown RBP14.3□□□□□ -0.12
CLN6-205ENST00000564846 NPYP01303 97 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 HTN1P15515 57 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 GTSCR1Q86UQ5 136 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 TENM1Q9UKZ4 2725 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 ATRQ13535 2644 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 SMIM17P0DL12 118 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 FAM19A2Q8N3H0 131 aa14.29□□□□□ -0.12
CLN6-205ENST00000564846 TNFRSF6BO95407 300 aa14.28□□□□□ -0.12
CLN6-205ENST00000564846 JOSD1Q15040 202 aaPredicted RBP14.28□□□□□ -0.12
CLN6-205ENST00000564846 FA2HQ7L5A8 372 aa14.28□□□□□ -0.12
CLN6-205ENST00000564846 MAP1LC3AQ9H492 121 aa14.28□□□□□ -0.12
CLN6-205ENST00000564846 AP5S1Q9NUS5 200 aa14.28□□□□□ -0.12
CLN6-205ENST00000564846 ZNF415Q09FC8 603 aa14.27□□□□□ -0.12
CLN6-205ENST00000564846 MORN3Q6PF18 240 aaPredicted RBP14.27□□□□□ -0.12
CLN6-205ENST00000564846 TMEM208Q9BTX3 173 aa14.27□□□□□ -0.12
CLN6-205ENST00000564846 KIF25-AS1Q9Y6Z4 181 aa14.27□□□□□ -0.12
CLN6-205ENST00000564846 LOC389332A0A1B0GUA5 103 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 GAS8-AS1O95177 125 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 IFI27P40305 119 aaPredicted RBP14.27□□□□□ -0.13
CLN6-205ENST00000564846 Q6ZWC4 215 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 PRIMA1Q86XR5 153 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 C1orf158Q8N1D5 194 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 POM121L12Q8N7R1 296 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 C1QTNF4Q9BXJ3 329 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 GSN-AS1Q9NRJ2 163 aa14.27□□□□□ -0.13
CLN6-205ENST00000564846 MUC4Q99102 2169 aa14.25□□□□□ -0.13
CLN6-205ENST00000564846 TRAV26-2A0A0B4J265 109 aa14.25□□□□□ -0.13
CLN6-205ENST00000564846 RPL35AP18077 110 aaKnown RBP14.25□□□□□ -0.13
CLN6-205ENST00000564846 ZNF876PQ49A33 203 aa14.25□□□□□ -0.13
CLN6-205ENST00000564846 NRACQ8N912 160 aa14.25□□□□□ -0.13
CLN6-205ENST00000564846 IGHV1-24A0A0C4DH33 117 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 MGPP08493 103 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 GATA1P15976 413 aaPredicted RBP14.24□□□□□ -0.13
CLN6-205ENST00000564846 PIK3CD-AS1Q5SR53 167 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 DEFB125Q8N687 156 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 C3orf56Q8N813 242 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 PTH2Q96A98 100 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 PRSS47A8MTI9 375 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 WIPF1O43516 503 aa14.24□□□□□ -0.13
CLN6-205ENST00000564846 GIG44P09565 113 aaPredicted RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 73.5 ms