RNA–Protein interactions for RNA: ENST00000564747.1

GTF3C1-205, Transcript of general transcription factor IIIC subunit 1, humanhuman

Gene GTF3C1, Length 2,798 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-205ENST00000564747 MGPP08493 103 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 WFDC2Q14508 124 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 Q6ZS46 218 aa11.69□□□□□ -0.54
GTF3C1-205ENST00000564747 IGHV4-61A0A0C4DH41 118 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 AZU1P20160 251 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 C12orf74Q32Q52 190 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 ORMDL2Q53FV1 153 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 TOMM6Q96B49 74 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 HIST1H4GQ99525 98 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 CRYBG3Q68DQ2 2970 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 TRAV12-1A0A0B4J245 112 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 RNF223E7ERA6 249 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 H3BMG7 143 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 BLCAPP62952 87 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 SIGMAR1Q99720 223 aa11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 SPANXB1Q9NS25 103 aaPredicted RBP11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 CHTOPQ9Y3Y2 248 aaKnown RBP11.68□□□□□ -0.54
GTF3C1-205ENST00000564747 PF4V1P10720 104 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 SRD5A1P18405 259 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 C20orf78Q9BR46 151 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 SPG11Q96JI7 2443 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 RNASE3P12724 160 aaKnown RBP11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 NEXN-AS1Q8NBZ9 246 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 FAM19A4Q96LR4 140 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 TSSC4Q9Y5U2 329 aaPredicted RBP11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 H3BUX3 64 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 SMAGPQ0VAQ4 97 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 RHPN1-AS1Q9BWJ2 59 aa11.67□□□□□ -0.54
GTF3C1-205ENST00000564747 IGHG2P01859 326 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 CD300EQ496F6 205 aaPredicted RBP11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 C2orf66Q6UXQ4 117 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 SPOCK3Q9BQ16 436 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 MUC4Q99102 2169 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 GAGE12HA6NDE8 117 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 EDN2P20800 178 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 USMG5Q96IX5 58 aa11.66□□□□□ -0.54
GTF3C1-205ENST00000564747 SCGB1A1P11684 91 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 ETDBQ3ZM63 59 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 AMTNQ6UX39 209 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 DEFB104AQ8WTQ1 72 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 SH2D6Q7Z4S9 175 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 WFDC12Q8WWY7 111 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 BAALCQ8WXS3 180 aa11.65□□□□□ -0.54
GTF3C1-205ENST00000564747 SLC25A16P16260 332 aa11.64□□□□□ -0.55
GTF3C1-205ENST00000564747 GNLYP22749 145 aa11.64□□□□□ -0.55
GTF3C1-205ENST00000564747 OR11H12B2RN74 326 aa11.64□□□□□ -0.55
GTF3C1-205ENST00000564747 OR11H1Q8NG94 326 aa11.64□□□□□ -0.55
GTF3C1-205ENST00000564747 OR11H2Q8NH07 326 aa11.64□□□□□ -0.55
GTF3C1-205ENST00000564747 PRSS29PA6NIE9 313 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 RRN3P1Q2M238 152 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 GAGE13Q4V321 117 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 APRG1Q8IVJ8 170 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 MYMXA0A1B0GTQ4 84 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 A6NDX4 124 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 MTURNQ8N3F0 131 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 JPT2Q9H910 190 aa11.63□□□□□ -0.55
GTF3C1-205ENST00000564747 TRBV7-3A0A075B6L6 115 aa11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 MED14OSP0DP75 135 aa11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 SPAG8Q99932 426 aaPredicted RBP11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 PIMREGQ9BSJ6 248 aa11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 H3BUA1 57 aa11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 DAZ1Q9NQZ3 744 aaKnown RBP11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 CYSLTR1Q9Y271 337 aa11.62□□□□□ -0.55
GTF3C1-205ENST00000564747 DUSP14O95147 198 aaKnown RBP11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 LINC00315P59091 139 aa11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 SPATA25Q9BR10 227 aa11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 KIF25-AS1Q9Y6Z4 181 aa11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 BRI3O95415 125 aa11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 CSPG4Q6UVK1 2322 aa11.61□□□□□ -0.55
GTF3C1-205ENST00000564747 IGLV1-40P01703 118 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 LGALS1P09382 135 aaKnown RBP11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 CLEC2AQ6UVW9 174 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 C10orf105Q8TEF2 133 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 PRADC1Q9BSG0 188 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 A0A1B0GWB2 263 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 LINC01619G3V211 115 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 CSMD2Q7Z408 3487 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 ACACBO00763 2458 aa11.6□□□□□ -0.55
GTF3C1-205ENST00000564747 KLLNB2CW77 178 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 CRYGDP07320 174 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 TMEM95Q3KNT9 176 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 PRO0461Q9UI25 63 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 IGHV4-30-2A0A087WSY4 118 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 A0A087WWL8 130 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 TRBV7-9A0A0J9YWB2 115 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 SCGB2A2Q13296 93 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 FAM159AQ6UWV7 190 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 POM121L12Q8N7R1 296 aa11.59□□□□□ -0.55
GTF3C1-205ENST00000564747 TRAV12-3A0A0B4J271 114 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 NXPH4O95158 308 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 TSHBP01222 138 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 EMP1P54849 157 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 CCL19Q99731 98 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 HOXA3O43365 443 aaPredicted RBP11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 PPP1R17O96001 155 aa11.58□□□□□ -0.56
GTF3C1-205ENST00000564747 AVPP01185 164 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 KLHL30-AS1Q8NEE0 82 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 DCANP1Q8TF63 244 aa11.57□□□□□ -0.56
GTF3C1-205ENST00000564747 TP53TG1Q9Y2A0 90 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 78.5 ms