RNA–Protein interactions for RNA: ENST00000563960.1

AC138869.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC138869.3, Length 2,486 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC138869.3-201ENST00000563960 HIST2H2BCQ6DN03 193 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 NUP37Q8NFH4 326 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 INS-IGF2F8WCM5 200 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 H7C1H1 209 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 HES1Q14469 280 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 C17orf58Q2M2W7 97 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 DSCAML1Q8TD84 2053 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 CSMD1Q96PZ7 3565 aa7.06□□□□□ -1.28
AC138869.3-201ENST00000563960 DSCAMO60469 2012 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 TRBV7-7A0A0K0K1E9 115 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 A0A1B0GX51 115 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 LGALS9O00182 355 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 MRPS12O15235 138 aaKnown RBP7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 IGLC6P0CF74 106 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 COX6B1P14854 86 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 CCL8P80075 99 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 ZNF672Q499Z4 452 aaPredicted RBP7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 ZNRF1Q8ND25 227 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 EDA2RQ9HAV5 297 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 IGLV3-9A0A075B6K5 115 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 SRRM5B3KS81 715 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 CGB3P0DN86 165 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 CGB7P0DN87 165 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 EGR2P11161 476 aaPredicted RBP7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 SLC25A16P16260 332 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 SUB1P53999 127 aaKnown RBP eCLIP7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 ZNF56Q15929 161 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 ZNF575Q86XF7 245 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 TIMD4Q96H15 378 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 PRR25Q96S07 402 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 CITED2Q99967 270 aaPredicted RBP7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 TMEM14CQ9P0S9 112 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 ZNRD1Q9P1U0 126 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 PRO1854Q9UHT4 67 aa7.05□□□□□ -1.28
AC138869.3-201ENST00000563960 NOTCH2Q04721 2471 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 TRAV12-1A0A0B4J245 112 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 M0R3E3 92 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 MZT1Q08AG7 82 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 LAGE3Q14657 143 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 FAM201AQ5SY85 155 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 SIGLEC15Q6ZMC9 328 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 C3orf22Q8N5N4 141 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 POM121L12Q8N7R1 296 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 KLHL30-AS1Q8NEE0 82 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 RAI1Q7Z5J4 1906 aaPredicted RBP7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 NBPF19A0A087WUL8 3843 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 TRBV19A0A075B6N1 114 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 IGHV3-21A0A0B4J1V1 117 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 FAM236AA0A1B0GUQ0 79 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 FAM236BA0A1B0GV22 79 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 LY6HO94772 140 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 HLA-DMBP28068 263 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 CEMP1Q6PRD7 247 aaPredicted RBP7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 OR4C13Q8NGP0 309 aa7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 RPUSD1Q9UJJ7 312 aaKnown RBP7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 FLNBO75369 2602 aaKnown RBP7.04□□□□□ -1.28
AC138869.3-201ENST00000563960 ITPR2Q14571 2701 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 APCP25054 2843 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 TRGV11A0A075B6L2 103 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 A0A0J9YY99 117 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 RBAKDNA6NC62 111 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 IGHV1-46P01743 117 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 IGHV3-30P01768 117 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 ELANEP08246 267 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 IGHV3-30-5P0DP03 117 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 EMP1P54849 157 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 LYZP61626 148 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 EBI3Q14213 229 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 OR13C6PQ8NH95 151 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 LINC01600Q96MT4 127 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 DYNLRB1Q9NP97 96 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 VPS13CQ709C8 3753 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 PLXNB1O43157 2135 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 H3BMM0 161 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 UBE2WQ96B02 151 aa7.03□□□□□ -1.28
AC138869.3-201ENST00000563960 NAV2Q8IVL1 2488 aa7.02□□□□□ -1.28
AC138869.3-201ENST00000563960 F5H768 121 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 LYNX1G3V0Z9 82 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 LYNX1P0DP58 116 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 TNFAIP6P98066 277 aaPredicted RBP7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 LINC01620Q4KN68 170 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 HCP5Q6MZN7 132 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 DUX4L9Q6RFH8 374 aaPredicted RBP7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 Q6ZS46 218 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 LINC00526Q96FQ7 95 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 UNC79Q9P2D8 2635 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 C17orf100A8MU93 164 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 UQCRQO14949 82 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 EIF4EBP3O60516 100 aaPredicted RBP7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 LHBP01229 141 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 RPS28P62857 69 aaKnown RBP7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 DTX2Q86UW9 622 aa7.02□□□□□ -1.29
AC138869.3-201ENST00000563960 ABCA1O95477 2261 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 ZNF80P51504 273 aaPredicted RBP7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 MFAP4P55083 255 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 TEX36Q5VZQ5 186 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 TMEM219Q86XT9 240 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 NEXN-AS1Q8NBZ9 246 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 PSMG3-AS1Q96PY0 264 aa7.01□□□□□ -1.29
AC138869.3-201ENST00000563960 CNFNQ9BYD5 112 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms