RNA–Protein interactions for RNA: ENST00000563941.5

MSLN-205, Transcript of mesothelin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSLN, Length 2,109 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSLN-205ENST00000563941 HIGD1BQ9P298 99 aa15.01□□□□□ -0.01
MSLN-205ENST00000563941 ZNF462Q96JM2 2506 aa15□□□□□ -0.01
MSLN-205ENST00000563941 MAP1AP78559 2803 aaPredicted RBP15□□□□□ -0.01
MSLN-205ENST00000563941 C9orf118A6NHY6 69 aa15□□□□□ -0.01
MSLN-205ENST00000563941 RNF223E7ERA6 249 aa15□□□□□ -0.01
MSLN-205ENST00000563941 SAMD13Q5VXD3 122 aa15□□□□□ -0.01
MSLN-205ENST00000563941 NXPH4O95158 308 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 CRYBG3Q68DQ2 2970 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 TOMM6Q96B49 74 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 PRB1P04280 392 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 HLA-DRB4P13762 266 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 HLA-DRB4X5D2U9 266 aa14.99□□□□□ -0.01
MSLN-205ENST00000563941 MUC4Q99102 2169 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 TRAV12-1A0A0B4J245 112 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 K7EMI3 77 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 PLNP26678 52 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 FAM159AQ6UWV7 190 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 WFDC12Q8WWY7 111 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 SCGB3A1Q96QR1 104 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 CHAC1Q9BUX1 264 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 CBY1Q9Y3M2 126 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 JMJD8Q96S16 334 aa14.98□□□□□ -0.01
MSLN-205ENST00000563941 CSPG4Q6UVK1 2322 aa14.97□□□□□ -0.01
MSLN-205ENST00000563941 TRBV25-1A0A075B6N4 114 aa14.97□□□□□ -0.01
MSLN-205ENST00000563941 BBC3Q96PG8 261 aaPredicted RBP14.97□□□□□ -0.01
MSLN-205ENST00000563941 A0A096LNT2 108 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 F8VRH5 84 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 H3BUT2 72 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 H7C1H1 209 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 POM121L12Q8N7R1 296 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 KIF25-AS1Q9Y6Z4 181 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 TMEM89A2RUT3 159 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 PPP1R17O96001 155 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 ZNF688P0C7X2 276 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 GCSHP23434 173 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 RAB37Q96AX2 223 aa14.96□□□□□ -0.01
MSLN-205ENST00000563941 TRAV12-3A0A0B4J271 114 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 C2orf66Q6UXQ4 117 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 NAA38Q9BRA0 125 aaKnown RBP14.95□□□□□ -0.02
MSLN-205ENST00000563941 GAGE10A6NGK3 116 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 J3QLI3 93 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 TGFAP01135 160 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 LINC00315P59091 139 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 MAPK1IP1LQ8NDC0 245 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 CSTL1Q9H114 145 aa14.95□□□□□ -0.02
MSLN-205ENST00000563941 CHTOPQ9Y3Y2 248 aaKnown RBP14.95□□□□□ -0.02
MSLN-205ENST00000563941 CD7P09564 240 aa14.94□□□□□ -0.02
MSLN-205ENST00000563941 FXYD2P54710 66 aa14.94□□□□□ -0.02
MSLN-205ENST00000563941 RBX1P62877 108 aa14.94□□□□□ -0.02
MSLN-205ENST00000563941 NEXN-AS1Q8NBZ9 246 aa14.94□□□□□ -0.02
MSLN-205ENST00000563941 EPG5Q9HCE0 2579 aa14.93□□□□□ -0.02
MSLN-205ENST00000563941 MAPKAPK5-AS1Q8N8E1 139 aa14.93□□□□□ -0.02
MSLN-205ENST00000563941 UBR5O95071 2799 aaPredicted RBP14.93□□□□□ -0.02
MSLN-205ENST00000563941 LRRK2Q5S007 2527 aa14.93□□□□□ -0.02
MSLN-205ENST00000563941 CST9LQ9H4G1 147 aa14.93□□□□□ -0.02
MSLN-205ENST00000563941 JPT2Q9H910 190 aa14.93□□□□□ -0.02
MSLN-205ENST00000563941 UFSP1Q6NVU6 142 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 GTF2H5Q6ZYL4 71 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 ODF3Q96PU9 254 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 A0A0J9YX75 114 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 GAGE12BA1L429 117 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 SNRPD3P62318 126 aaKnown RBP14.92□□□□□ -0.02
MSLN-205ENST00000563941 NEGR1Q7Z3B1 354 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 BAALCQ8WXS3 180 aa14.92□□□□□ -0.02
MSLN-205ENST00000563941 VPREB3Q9UKI3 123 aa14.91□□□□□ -0.02
MSLN-205ENST00000563941 IGHV4OR15-8A0A075B7B6 117 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 A0A087WW49 117 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 K7EQG2 157 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 IGKV3-20P01619 116 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 SMIM13P0DJ93 91 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 SYNJ2BPP57105 145 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 SUMO4Q6EEV6 95 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 FAM208BQ5VWN6 2430 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 A0A087WWL8 130 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 K7EP34 96 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 LGALS1P09382 135 aaKnown RBP14.9□□□□□ -0.02
MSLN-205ENST00000563941 ZNF843Q8N446 348 aa14.9□□□□□ -0.02
MSLN-205ENST00000563941 TRAV12-2A0A075B6T6 113 aa14.89□□□□□ -0.03
MSLN-205ENST00000563941 RPL32P62910 135 aaKnown RBP14.89□□□□□ -0.03
MSLN-205ENST00000563941 CEND1Q8N111 149 aa14.89□□□□□ -0.03
MSLN-205ENST00000563941 CENPEQ02224 2701 aa14.89□□□□□ -0.03
MSLN-205ENST00000563941 A0A1W2PPM0 123 aa14.89□□□□□ -0.03
MSLN-205ENST00000563941 TM2D2Q9BX73 214 aa14.89□□□□□ -0.03
MSLN-205ENST00000563941 IGHV3-16A0A0C4DH30 117 aa14.88□□□□□ -0.03
MSLN-205ENST00000563941 COX6B1P14854 86 aa14.88□□□□□ -0.03
MSLN-205ENST00000563941 C9orf85Q96MD7 179 aa14.88□□□□□ -0.03
MSLN-205ENST00000563941 PRSS29PA6NIE9 313 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 OCIAD2Q56VL3 154 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 ZNF702PQ9H963 129 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 CSMD2Q7Z408 3487 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 F5H697 171 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 LGALS9O00182 355 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 DUSP14O95147 198 aaKnown RBP14.87□□□□□ -0.03
MSLN-205ENST00000563941 ELANEP08246 267 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 CDKN1BP46527 198 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 POLR2KP53803 58 aaKnown RBP14.87□□□□□ -0.03
MSLN-205ENST00000563941 CYSLTR1Q9Y271 337 aa14.87□□□□□ -0.03
MSLN-205ENST00000563941 OR11H12B2RN74 326 aa14.86□□□□□ -0.03
MSLN-205ENST00000563941 K7ERJ3 54 aa14.86□□□□□ -0.03
MSLN-205ENST00000563941 FSHBP01225 129 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms