RNA–Protein interactions for RNA: ENST00000563869.1

SYNGR3-203, Transcript of synaptogyrin 3, humanhuman

TSL 2

Gene SYNGR3, Length 860 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-203ENST00000563869 ATP5G1P05496 136 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 COMMD7Q86VX2 200 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 OR2D3Q8NGH3 330 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 C9orf85Q96MD7 179 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 RPP21Q9H633 154 aaKnown RBP13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 OSTCQ9NRP0 149 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 MDFICQ9P1T7 246 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 C11orf21Q9P2W6 132 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 PHLDA3Q9Y5J5 127 aa13.46□□□□□ -0.25
SYNGR3-203ENST00000563869 TRGV1A0A0A0MS02 117 aa13.45□□□□□ -0.26
SYNGR3-203ENST00000563869 A8MWL6 223 aa13.45□□□□□ -0.26
SYNGR3-203ENST00000563869 OR5AL1P0C617 328 aa13.45□□□□□ -0.26
SYNGR3-203ENST00000563869 SRSF3P84103 164 aaKnown RBP13.45□□□□□ -0.26
SYNGR3-203ENST00000563869 SLAQ13239 276 aa13.45□□□□□ -0.26
SYNGR3-203ENST00000563869 FAM231BA6NCW3 169 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 PGPEP1LA6NFU8 196 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 DEFB130BP0DP73 79 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 DEFB130AP0DP74 79 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 C12orf74Q32Q52 190 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 Q6ZQT7 251 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 ZFP82Q8N141 532 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 NUDT10Q8NFP7 164 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 NUDT11Q96G61 164 aa13.44□□□□□ -0.26
SYNGR3-203ENST00000563869 A8MWV9 139 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 C9JQL5 133 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 PPP1R2P9O14990 202 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 GATCO43716 136 aaKnown RBP13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 PRM2P04554 102 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 ADIRFQ15847 76 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 ZNF876PQ49A33 203 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 CELA1Q9UNI1 258 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 DNAH10Q8IVF4 4471 aa13.43□□□□□ -0.26
SYNGR3-203ENST00000563869 KMT2AQ03164 3969 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 K7EN84 100 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 ARMS2P0C7Q2 107 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 RNASE3P12724 160 aaKnown RBP13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 NANOS2P60321 138 aaKnown RBP13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 RPL23P62829 140 aaKnown RBP13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 CACNG7P62955 275 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 NDUFA5Q16718 116 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 SFRP2Q96HF1 295 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 SEC11CQ9BY50 192 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 GFRA4Q9GZZ7 299 aa13.42□□□□□ -0.26
SYNGR3-203ENST00000563869 DEFB131BA0A096LNP1 70 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 GAGE12BA1L429 117 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 TMEM218A2RU14 115 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 H3BVH4 76 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 SNAI2O43623 268 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 GAGE7O76087 117 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 GAGE12FP0CL80 117 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 GAGE12GP0CL81 117 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 GAGE12IP0CL82 117 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 WDR73Q6P4I2 378 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 Q6ZTI0 123 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 FER1L6-AS1Q8NA97 138 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 ISOC2Q96AB3 205 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 BORCS7Q96B45 105 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 SSBP4Q9BWG4 385 aaPredicted RBP13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 SCRT2Q9NQ03 307 aa13.41□□□□□ -0.26
SYNGR3-203ENST00000563869 TMSB15BA0A087X1C1 80 aa13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 TRAV4A0A0B4J268 109 aa13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 F8W036 122 aa13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 RHODO00212 210 aa13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 CEMP1Q6PRD7 247 aaPredicted RBP13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 Q6ZTC4 211 aa13.4□□□□□ -0.26
SYNGR3-203ENST00000563869 MUC4Q99102 2169 aa13.39□□□□□ -0.27
SYNGR3-203ENST00000563869 OR10G8Q8NGN5 311 aa13.39□□□□□ -0.27
SYNGR3-203ENST00000563869 RNASE7Q9H1E1 156 aaKnown RBP13.39□□□□□ -0.27
SYNGR3-203ENST00000563869 GRIFINA4D1Z8 144 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 H3BNG1 76 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 MT-ND4LP03901 98 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 SPANXN1Q5VSR9 72 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 ZFP2Q6ZN57 461 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 OR4C5Q8NGB2 326 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 TSKUQ8WUA8 353 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 ANAPC16Q96DE5 110 aa13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 MRPL16Q9NX20 251 aaKnown RBP13.38□□□□□ -0.27
SYNGR3-203ENST00000563869 IGLC6P0CF74 106 aa13.37□□□□□ -0.27
SYNGR3-203ENST00000563869 RPL19P84098 196 aaKnown RBP13.37□□□□□ -0.27
SYNGR3-203ENST00000563869 C15orf53Q8NAA6 179 aa13.37□□□□□ -0.27
SYNGR3-203ENST00000563869 NXPH4O95158 308 aa13.36□□□□□ -0.27
SYNGR3-203ENST00000563869 CTRLP40313 264 aa13.36□□□□□ -0.27
SYNGR3-203ENST00000563869 FOXA3P55318 350 aaPredicted RBP13.36□□□□□ -0.27
SYNGR3-203ENST00000563869 PCLOQ9Y6V0 5065 aa13.36□□□□□ -0.27
SYNGR3-203ENST00000563869 IGHV4-4A0A075B6R2 117 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 F5H768 121 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 TRGC1P0CF51 173 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 SMIM17P0DL12 118 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 SMIM15Q7Z3B0 74 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 AP1S3Q96PC3 154 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 CNFNQ9BYD5 112 aa13.35□□□□□ -0.27
SYNGR3-203ENST00000563869 TRGV4A0A0C4DH28 118 aa13.34□□□□□ -0.27
SYNGR3-203ENST00000563869 M0R381 172 aa13.34□□□□□ -0.27
SYNGR3-203ENST00000563869 NAT8BQ9UHF3 227 aa13.34□□□□□ -0.27
SYNGR3-203ENST00000563869 PRO0255Q9UI72 69 aa13.34□□□□□ -0.27
SYNGR3-203ENST00000563869 RS1O15537 224 aa13.33□□□□□ -0.28
SYNGR3-203ENST00000563869 HTN3P15516 51 aa13.33□□□□□ -0.28
SYNGR3-203ENST00000563869 TPPP3Q9BW30 176 aa13.33□□□□□ -0.28
SYNGR3-203ENST00000563869 SH2D6Q7Z4S9 175 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms