RNA–Protein interactions for RNA: ENST00000563672.5

CMTM3-206, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 4

Gene CMTM3, Length 460 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-206ENST00000563672 ALKAL2Q6UX46 152 aa14.04□□□□□ -0.16
CMTM3-206ENST00000563672 DNAH17Q9UFH2 4485 aa14.04□□□□□ -0.16
CMTM3-206ENST00000563672 RS1O15537 224 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 IFNA1P01562 189 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 S100A4P26447 101 aaKnown RBP14.03□□□□□ -0.16
CMTM3-206ENST00000563672 RPL35P42766 123 aaKnown RBP14.03□□□□□ -0.16
CMTM3-206ENST00000563672 LINC01559Q495D7 138 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 IL36BQ9NZH7 164 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 BOLA1Q9Y3E2 137 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 ICOSQ9Y6W8 199 aa14.03□□□□□ -0.16
CMTM3-206ENST00000563672 M0R036 132 aa14.02□□□□□ -0.17
CMTM3-206ENST00000563672 MEF2BQ02080 365 aaPredicted RBP14.02□□□□□ -0.17
CMTM3-206ENST00000563672 ZNF506Q5JVG8 444 aa14.02□□□□□ -0.17
CMTM3-206ENST00000563672 CFAP126Q5VTH2 177 aa14.02□□□□□ -0.17
CMTM3-206ENST00000563672 DERL1Q9BUN8 251 aa14.02□□□□□ -0.17
CMTM3-206ENST00000563672 BIRC6Q9NR09 4857 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 CIDEAO60543 219 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 BCL2P10415 239 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 PIK3CD-AS1Q5SR53 167 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 UPK3BQ9BT76 320 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 FAT2Q9NYQ8 4349 aa14.01□□□□□ -0.17
CMTM3-206ENST00000563672 GRIFINA4D1Z8 144 aa14□□□□□ -0.17
CMTM3-206ENST00000563672 PDE6DO43924 150 aa14□□□□□ -0.17
CMTM3-206ENST00000563672 GATA1P15976 413 aaPredicted RBP14□□□□□ -0.17
CMTM3-206ENST00000563672 BLOC1S1P78537 153 aa14□□□□□ -0.17
CMTM3-206ENST00000563672 MRPL23Q16540 153 aaKnown RBP14□□□□□ -0.17
CMTM3-206ENST00000563672 VAX2Q9UIW0 290 aa14□□□□□ -0.17
CMTM3-206ENST00000563672 MRPS16Q9Y3D3 137 aaKnown RBP14□□□□□ -0.17
CMTM3-206ENST00000563672 ARMS2P0C7Q2 107 aa13.99□□□□□ -0.17
CMTM3-206ENST00000563672 TAGLN2P37802 199 aaKnown RBP13.99□□□□□ -0.17
CMTM3-206ENST00000563672 LYPD6BQ8NI32 183 aa13.99□□□□□ -0.17
CMTM3-206ENST00000563672 SCRT2Q9NQ03 307 aa13.99□□□□□ -0.17
CMTM3-206ENST00000563672 TMSB15BA0A087X1C1 80 aa13.98□□□□□ -0.17
CMTM3-206ENST00000563672 H3BVH4 76 aa13.98□□□□□ -0.17
CMTM3-206ENST00000563672 K7EQD1 137 aa13.98□□□□□ -0.17
CMTM3-206ENST00000563672 Q9H8V8 135 aa13.98□□□□□ -0.17
CMTM3-206ENST00000563672 NBDYA0A0U1RRE5 68 aa13.97□□□□□ -0.17
CMTM3-206ENST00000563672 IGLV2-8P01709 118 aa13.97□□□□□ -0.17
CMTM3-206ENST00000563672 GYPEP15421 78 aa13.97□□□□□ -0.17
CMTM3-206ENST00000563672 CENPWQ5EE01 88 aa13.97□□□□□ -0.17
CMTM3-206ENST00000563672 DMRTA1Q5VZB9 504 aa13.97□□□□□ -0.17
CMTM3-206ENST00000563672 RAB19A4D1S5 217 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 A8MWV9 139 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 RTL8CO15255 209 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 LYPD5Q6UWN5 251 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 NEGR1Q7Z3B1 354 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 MED9Q9NWA0 146 aa13.96□□□□□ -0.17
CMTM3-206ENST00000563672 HECTD4Q9Y4D8 3996 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 TRBV6-4A0A1B0GX49 114 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 CXCL1P09341 107 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 RPL19P84098 196 aaKnown RBP13.95□□□□□ -0.18
CMTM3-206ENST00000563672 PRR27Q6MZM9 219 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 ZFP2Q6ZN57 461 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 SLC25A29Q8N8R3 303 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 SYT8Q8NBV8 401 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 PCNPQ8WW12 178 aaKnown RBP13.95□□□□□ -0.18
CMTM3-206ENST00000563672 PARLQ9H300 379 aa13.95□□□□□ -0.18
CMTM3-206ENST00000563672 IGHV3-73A0A0B4J1V6 119 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 LOC100131303A0A0U1RQF7 123 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 SRIP30626 198 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 UFSP1Q6NVU6 142 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 LINC00336Q6ZUF6 198 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 SMIM12Q96EX1 92 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 JPT2Q9H910 190 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 PHLDA3Q9Y5J5 127 aa13.94□□□□□ -0.18
CMTM3-206ENST00000563672 TRBV20OR9-2A0A075B6H5 130 aa13.93□□□□□ -0.18
CMTM3-206ENST00000563672 MED14OSP0DP75 135 aa13.93□□□□□ -0.18
CMTM3-206ENST00000563672 GNG4P50150 75 aa13.93□□□□□ -0.18
CMTM3-206ENST00000563672 MGST1P10620 155 aaKnown RBP13.92□□□□□ -0.18
CMTM3-206ENST00000563672 RHOHQ15669 191 aa13.92□□□□□ -0.18
CMTM3-206ENST00000563672 Q6ZSN1 163 aa13.92□□□□□ -0.18
CMTM3-206ENST00000563672 SAMD10Q9BYL1 202 aa13.92□□□□□ -0.18
CMTM3-206ENST00000563672 RBFOX3A6NFN3 312 aa13.91□□□□□ -0.18
CMTM3-206ENST00000563672 C1orf134Q5TEV5 83 aa13.91□□□□□ -0.18
CMTM3-206ENST00000563672 SH2D6Q7Z4S9 175 aa13.91□□□□□ -0.18
CMTM3-206ENST00000563672 SFRP2Q96HF1 295 aa13.91□□□□□ -0.18
CMTM3-206ENST00000563672 PRADC1Q9BSG0 188 aa13.91□□□□□ -0.18
CMTM3-206ENST00000563672 SSBP4Q9BWG4 385 aaPredicted RBP13.91□□□□□ -0.18
CMTM3-206ENST00000563672 C19orf71A6NCJ1 209 aa13.9□□□□□ -0.18
CMTM3-206ENST00000563672 M0R381 172 aa13.9□□□□□ -0.18
CMTM3-206ENST00000563672 NXPH4O95158 308 aa13.9□□□□□ -0.18
CMTM3-206ENST00000563672 ZFP82Q8N141 532 aa13.9□□□□□ -0.18
CMTM3-206ENST00000563672 KRTAP1-5Q9BYS1 174 aa13.9□□□□□ -0.18
CMTM3-206ENST00000563672 A0A1W2PPQ1 181 aa13.89□□□□□ -0.19
CMTM3-206ENST00000563672 SNAI2O43623 268 aa13.89□□□□□ -0.19
CMTM3-206ENST00000563672 TTC32Q5I0X7 151 aa13.89□□□□□ -0.19
CMTM3-206ENST00000563672 SOHLH1Q5JUK2 328 aa13.89□□□□□ -0.19
CMTM3-206ENST00000563672 TMEM250H0YL14 139 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 RHODO00212 210 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 SIVA1O15304 175 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 CRYGDP07320 174 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 OR5AL1P0C617 328 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 TIRAPP58753 221 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 OR10AG1Q8NH19 301 aa13.88□□□□□ -0.19
CMTM3-206ENST00000563672 DAZAP1Q96EP5 407 aaKnown RBP13.88□□□□□ -0.19
CMTM3-206ENST00000563672 PRSS29PA6NIE9 313 aa13.87□□□□□ -0.19
CMTM3-206ENST00000563672 C6orf223Q8N319 242 aa13.87□□□□□ -0.19
CMTM3-206ENST00000563672 BIN3Q9NQY0 253 aa13.87□□□□□ -0.19
CMTM3-206ENST00000563672 A0A087WWL8 130 aa13.86□□□□□ -0.19
CMTM3-206ENST00000563672 A0A1B0GVY2 172 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms