RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 A0A1W2PRX2 142 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 OR4C46A6NHA9 309 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 MED14OSP0DP75 135 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 CD28P10747 220 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 SPINK13Q1W4C9 94 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 ZNF705AQ6ZN79 300 aaPredicted RBP14.21□□□□□ -0.14
SMPD3-203ENST00000563226 TMEM61Q8N0U2 210 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 OR2K2Q8NGT1 345 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 PEMTQ9UBM1 199 aa14.21□□□□□ -0.14
SMPD3-203ENST00000563226 FAM159AQ6UWV7 190 aa14.2□□□□□ -0.14
SMPD3-203ENST00000563226 RAX2Q96IS3 184 aa14.2□□□□□ -0.14
SMPD3-203ENST00000563226 TRAV9-2A0A087WT02 112 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 FOXI2Q6ZQN5 318 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 PMCHL2Q9BQD1 86 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 KNCNA6PVL3 124 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 EREGO14944 169 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 HBDP02042 147 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 PET117Q6UWS5 81 aa14.19□□□□□ -0.14
SMPD3-203ENST00000563226 C14orf178Q8N769 122 aaPredicted RBP14.19□□□□□ -0.14
SMPD3-203ENST00000563226 RNASE1P07998 156 aaKnown RBP14.18□□□□□ -0.14
SMPD3-203ENST00000563226 ZNF124Q15973 351 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 AMTNQ6UX39 209 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 IGLV2-18A0A075B6J9 118 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 LINC01546A6NGU7 62 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 CD7P09564 240 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 IGLC3P0DOY3 106 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 IGLL1P15814 213 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 CDKN1BP46527 198 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 DEFB131AP59861 70 aa14.18□□□□□ -0.14
SMPD3-203ENST00000563226 LINC01006Q8NI28 216 aa14.17□□□□□ -0.14
SMPD3-203ENST00000563226 C20orf202A1L168 122 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 DUSP14O95147 198 aaKnown RBP14.16□□□□□ -0.14
SMPD3-203ENST00000563226 LINC01545Q5VT33 79 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 DYNLRB2Q8TF09 96 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 NXT2Q9NPJ8 142 aaKnown RBP14.16□□□□□ -0.14
SMPD3-203ENST00000563226 hDV102S1A0JD36 115 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 NXPH4O95158 308 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 CITED2Q99967 270 aaPredicted RBP14.16□□□□□ -0.14
SMPD3-203ENST00000563226 SNHG12Q9BXW3 62 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 DPH3P1Q9H4G8 78 aa14.16□□□□□ -0.14
SMPD3-203ENST00000563226 WNK1Q9H4A3 2382 aa14.15□□□□□ -0.14
SMPD3-203ENST00000563226 DEFB114Q30KQ6 69 aa14.15□□□□□ -0.14
SMPD3-203ENST00000563226 Q8N8P6 123 aa14.15□□□□□ -0.14
SMPD3-203ENST00000563226 MRAP2Q96G30 205 aa14.15□□□□□ -0.14
SMPD3-203ENST00000563226 FHL3Q13643 280 aa14.14□□□□□ -0.15
SMPD3-203ENST00000563226 SETD2Q9BYW2 2564 aaPredicted RBP14.14□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1BA6NDE4 496 aaKnown RBP14.14□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1EA6NEQ0 496 aaKnown RBP14.14□□□□□ -0.15
SMPD3-203ENST00000563226 MGPP08493 103 aa14.14□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1DP0C7P1 496 aaKnown RBP14.14□□□□□ -0.15
SMPD3-203ENST00000563226 CD300EQ496F6 205 aaPredicted RBP14.14□□□□□ -0.15
SMPD3-203ENST00000563226 JPT2Q9H910 190 aa14.14□□□□□ -0.15
SMPD3-203ENST00000563226 MDFICQ9P1T7 246 aa14.14□□□□□ -0.15
SMPD3-203ENST00000563226 IGHV3-16A0A0C4DH30 117 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1A1P0DJD3 496 aaKnown RBP14.13□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1CP0DJD4 496 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 TSPOP30536 169 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 RBMY1FQ15415 496 aaKnown RBP14.13□□□□□ -0.15
SMPD3-203ENST00000563226 Q8N1Y9 231 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 RASL10AQ92737 203 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 AP1S3Q96PC3 154 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 C16orf95Q9H693 158 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 PRSS47A8MTI9 375 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 CCL24O00175 119 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 RPL39LQ96EH5 51 aaKnown RBP14.13□□□□□ -0.15
SMPD3-203ENST00000563226 UQCR10Q9UDW1 63 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 KIF25-AS1Q9Y6Z4 181 aa14.13□□□□□ -0.15
SMPD3-203ENST00000563226 TRAV2A0A0B4J234 112 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 HLA-DRB4P13762 266 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 DEFB125Q8N687 156 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 C18orf15Q96N68 181 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 MAP6D1Q9H9H5 199 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 HLA-DRB4X5D2U9 266 aa14.12□□□□□ -0.15
SMPD3-203ENST00000563226 IGHV1OR15-1A0A075B7D0 117 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 H3BMM0 161 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 TCAPO15273 167 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 FCER1GP30273 86 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 HILS1P60008 231 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 IFI27L1Q96BM0 104 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 C9orf85Q96MD7 179 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 TP73-AS1Q9UF72 201 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 LINC00315P59091 139 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 ZNF418Q8TF45 676 aaPredicted RBP14.11□□□□□ -0.15
SMPD3-203ENST00000563226 TMEM158Q8WZ71 300 aa14.11□□□□□ -0.15
SMPD3-203ENST00000563226 A8MTW9 85 aa14.1□□□□□ -0.15
SMPD3-203ENST00000563226 Q6ZN92 141 aa14.1□□□□□ -0.15
SMPD3-203ENST00000563226 C2orf88Q9BSF0 95 aa14.1□□□□□ -0.15
SMPD3-203ENST00000563226 ZNF256Q9Y2P7 627 aaPredicted RBP14.1□□□□□ -0.15
SMPD3-203ENST00000563226 OTOGQ6ZRI0 2925 aa14.09□□□□□ -0.15
SMPD3-203ENST00000563226 M0R143 59 aa14.09□□□□□ -0.15
SMPD3-203ENST00000563226 SMIM2Q9BVW6 85 aa14.09□□□□□ -0.15
SMPD3-203ENST00000563226 TMEM160Q9NX00 188 aa14.09□□□□□ -0.15
SMPD3-203ENST00000563226 TSSC4Q9Y5U2 329 aaPredicted RBP14.09□□□□□ -0.15
SMPD3-203ENST00000563226 A0A087WWL8 130 aa14.08□□□□□ -0.15
SMPD3-203ENST00000563226 LY6G6DO95868 133 aa14.08□□□□□ -0.15
SMPD3-203ENST00000563226 SCGB2A2Q13296 93 aa14.08□□□□□ -0.15
SMPD3-203ENST00000563226 POM121L12Q8N7R1 296 aa14.08□□□□□ -0.15
SMPD3-203ENST00000563226 HIVEP2P31629 2446 aa14.08□□□□□ -0.16
SMPD3-203ENST00000563226 A0A1B0GV90 55 aa14.08□□□□□ -0.16
SMPD3-203ENST00000563226 SUMO2P61956 95 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms