RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 GNG5P63218 68 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 ERCC8Q13216 396 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 RNF212Q495C1 297 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 FAM74A1Q5RGS3 127 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 AKR1C8PQ5T2L2 129 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 PRR9Q5T870 116 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 EBLN2Q6P2I7 272 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 CFAP161Q6P656 301 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 DPPA3Q6W0C5 159 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 Q6ZQT7 251 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 ZFAND2AQ8N6M9 145 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 Q8NAQ8 132 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 ZNF738Q8NE65 137 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 OR4B1Q8NGF8 309 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 LYPD6BQ8NI32 183 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 TVP23CQ96ET8 276 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 ODF3Q96PU9 254 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 MAP1LC3BQ9GZQ8 125 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 OTORQ9NRC9 128 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 ZNF492Q9P255 531 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 U3KQK5 164 aa3.2□□□□□ -1.9
SMG1-206ENST00000562668 TRAV12-2A0A075B6T6 113 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 TRBV7-9A0A0J9YWB2 115 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 RBAKDNA6NC62 111 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 PGPA6NDG6 321 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 ZNF324O75467 553 aaPredicted RBP3.19□□□□□ -1.9
SMG1-206ENST00000562668 TCRAP04437 139 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 PRM2P04554 102 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 EIF5AP63241 154 aaKnown RBP3.19□□□□□ -1.9
SMG1-206ENST00000562668 HIST1H1AQ02539 215 aaPredicted RBP3.19□□□□□ -1.9
SMG1-206ENST00000562668 SPINK13Q1W4C9 94 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 FAM213BQ8TBF2 198 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 LRRC20Q8TCA0 184 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 RXFP4Q8TDU9 374 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 IGF2BP2-AS1Q96M15 143 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 LINC00477Q96M19 166 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 C11orf68Q9H3H3 251 aaKnown RBP3.19□□□□□ -1.9
SMG1-206ENST00000562668 TMEM167BQ9NRX6 74 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 XCL2Q9UBD3 114 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 EPDR1Q9UM22 224 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 ARL2-SNX15V9GYD0 113 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 DNAH10Q8IVF4 4471 aa3.19□□□□□ -1.9
SMG1-206ENST00000562668 TRAV8-1A0A0A6YYK1 113 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 PHOX2AO14813 284 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 NMBP08949 121 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 CDKN1BP46527 198 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 ATP5G3P48201 142 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 RAB5CP51148 216 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 ZNF138P52744 262 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 UBE2G2P60604 165 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 ALKAL2Q6UX46 152 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 COX8CQ7Z4L0 72 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 C5orf17Q8NAS9 161 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 OR10J6PQ8NGY7 276 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 OR11H2Q8NH07 326 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 Q8TAT8 98 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 SFT2D1Q8WV19 159 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 RARRES2Q99969 163 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 LINC00467Q9BRT7 94 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 KLF12Q9Y4X4 402 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 LENEPQ9Y5L5 61 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 DNAH17Q9UFH2 4485 aa3.18□□□□□ -1.9
SMG1-206ENST00000562668 TRBV6-1A0A0K0K1D8 114 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 A0A1B0GV50 99 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 DEFB4AO15263 64 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 INSP01308 110 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 MIFP14174 115 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 LEPP41159 167 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 ZNF80P51504 273 aaPredicted RBP3.17□□□□□ -1.9
SMG1-206ENST00000562668 NUTF2P61970 127 aaKnown RBP3.17□□□□□ -1.9
SMG1-206ENST00000562668 IFITM2Q01629 132 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 BTN1A1Q13410 526 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 Q6AWC8 147 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 EIF5AL1Q6IS14 154 aaKnown RBP3.17□□□□□ -1.9
SMG1-206ENST00000562668 TEX261Q6UWH6 196 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 GOLT1AQ6ZVE7 132 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 CYB561D1Q8N8Q1 229 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 TMEM75Q8N9X5 138 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 C11orf72Q8NBR9 251 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 RNASE8Q8TDE3 154 aaKnown RBP3.17□□□□□ -1.9
SMG1-206ENST00000562668 C11orf52Q96A22 123 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 C20orf144Q9BQM9 153 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 ATG101Q9BSB4 218 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 Q9H8V8 135 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 CELA1Q9UNI1 258 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 PSG8Q9UQ74 426 aa3.17□□□□□ -1.9
SMG1-206ENST00000562668 TRAV12-3A0A0B4J271 114 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TRAV34A0A0B4J273 112 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 SERTM2A0A1B0GWG4 89 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 C7orf71A4D174 169 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 SMIM9A6NGZ8 99 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 ZNF705GA8MUZ8 300 aaPredicted RBP3.16□□□□□ -1.9
SMG1-206ENST00000562668 PEX7O00628 323 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 RTL8CO15255 209 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 IGLV2-8P01709 118 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TSPOP30536 169 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 CSN1S1P47710 185 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 CRIP1P50238 77 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 TAS2R60P59551 318 aa3.16□□□□□ -1.9
SMG1-206ENST00000562668 FLI1Q01543 452 aaPredicted RBP3.16□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 296.9 ms