RNA–Protein interactions for RNA: ENST00000562078.5

CLK3-206, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 2,455 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-206ENST00000562078 CHCHD5Q9BSY4 110 aa10.25□□□□□ -0.77
CLK3-206ENST00000562078 MDFICQ9P1T7 246 aa10.25□□□□□ -0.77
CLK3-206ENST00000562078 IGHV1-3A0A0C4DH29 117 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 A0A1W2PPI3 338 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 C9JAW5 83 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 MRGPRG-AS1Q2M3A8 158 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 C15orf53Q8NAA6 179 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 TIMD4Q96H15 378 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 TRBV19A0A075B6N1 114 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 INS-IGF2F8WCM5 200 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 EGR2P11161 476 aaPredicted RBP10.24□□□□□ -0.77
CLK3-206ENST00000562078 SCGB1D4Q6XE38 83 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 SIGLEC15Q6ZMC9 328 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 NRGNQ92686 78 aa10.24□□□□□ -0.77
CLK3-206ENST00000562078 FAM208BQ5VWN6 2430 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 WIPF1O43516 503 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 LINC01559Q495D7 138 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 TRPT1Q86TN4 253 aaKnown RBP10.23□□□□□ -0.77
CLK3-206ENST00000562078 OR10J6PQ8NGY7 276 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 LINC01587Q99440 93 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 IGLV2-18A0A075B6J9 118 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 LOC107984640A0A0U1RRK4 108 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 ZNF815PA8K554 130 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 TMEM14CQ9P0S9 112 aa10.23□□□□□ -0.77
CLK3-206ENST00000562078 LINC00694P0DN24 101 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 Q8N1Y9 231 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 Q8N8P6 123 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 NTN5Q8WTR8 489 aaPredicted RBP10.22□□□□□ -0.77
CLK3-206ENST00000562078 LY6G5BQ8NDX9 201 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 PRADC1Q9BSG0 188 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 C21orf62Q9NYP8 219 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 LRRK2Q5S007 2527 aa10.22□□□□□ -0.77
CLK3-206ENST00000562078 F8VRH5 84 aa10.21□□□□□ -0.77
CLK3-206ENST00000562078 IGHG4P01861 327 aa10.21□□□□□ -0.77
CLK3-206ENST00000562078 ZNF575Q86XF7 245 aa10.21□□□□□ -0.77
CLK3-206ENST00000562078 TMEM126AQ9H061 195 aa10.21□□□□□ -0.77
CLK3-206ENST00000562078 RPL27AP46776 148 aaKnown RBP10.21□□□□□ -0.78
CLK3-206ENST00000562078 KLHL30-AS1Q8NEE0 82 aa10.21□□□□□ -0.78
CLK3-206ENST00000562078 SIGLEC9Q9Y336 463 aa10.21□□□□□ -0.78
CLK3-206ENST00000562078 TEX49A0A1B0GTD5 131 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 H7C1H1 209 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 IGLC6P0CF74 106 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 CFC1BP0CG36 223 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 CFC1P0CG37 223 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 ZNF80P51504 273 aaPredicted RBP10.2□□□□□ -0.78
CLK3-206ENST00000562078 CRYBG3Q68DQ2 2970 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 IGFBPL1Q8WX77 278 aa10.2□□□□□ -0.78
CLK3-206ENST00000562078 TRAV26-2A0A0B4J265 109 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 CRYGBP07316 175 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 SLC25A16P16260 332 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 LAGE3Q14657 143 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 KLK15Q9H2R5 256 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 SPANXA1Q9NS26 97 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 TRAV8-4A0A0B4J246 113 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 LY6LH3BQJ8 138 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 TIMM23O14925 209 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 PRR25Q96S07 402 aa10.19□□□□□ -0.78
CLK3-206ENST00000562078 IGKV2-40A0A087WW87 121 aaPredicted RBP10.18□□□□□ -0.78
CLK3-206ENST00000562078 IGKV2D-40P01614 121 aaPredicted RBP10.18□□□□□ -0.78
CLK3-206ENST00000562078 COX6B1P14854 86 aa10.18□□□□□ -0.78
CLK3-206ENST00000562078 Q8TAT8 98 aa10.18□□□□□ -0.78
CLK3-206ENST00000562078 C10orf126Q8N4M7 172 aa10.18□□□□□ -0.78
CLK3-206ENST00000562078 PLGLAQ15195 96 aa10.17□□□□□ -0.78
CLK3-206ENST00000562078 MRPL23Q16540 153 aaKnown RBP10.17□□□□□ -0.78
CLK3-206ENST00000562078 CCL19Q99731 98 aa10.17□□□□□ -0.78
CLK3-206ENST00000562078 TRAV2A0A0B4J234 112 aa10.17□□□□□ -0.78
CLK3-206ENST00000562078 DNAJC30Q96LL9 226 aa10.17□□□□□ -0.78
CLK3-206ENST00000562078 TEX22C9J3V5 150 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 ORM1P02763 201 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 RPL7P18124 248 aaKnown RBP10.16□□□□□ -0.78
CLK3-206ENST00000562078 SMIM9A6NGZ8 99 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 M0R1W7 72 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 TRGV3P03979 118 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 Q6ZS46 218 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 DPM3Q9P2X0 92 aa10.16□□□□□ -0.78
CLK3-206ENST00000562078 TRAV12-1A0A0B4J245 112 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 OOSP1A8MZH6 123 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 H7C2G1 150 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 ELANEP08246 267 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 SHANK2-AS3Q9BTD1 123 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 SVEP1Q4LDE5 3571 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 ABCA2Q9BZC7 2435 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 MRPS12O15235 138 aaKnown RBP10.15□□□□□ -0.78
CLK3-206ENST00000562078 DUSP14O95147 198 aaKnown RBP10.15□□□□□ -0.78
CLK3-206ENST00000562078 PRO1854Q9UHT4 67 aa10.15□□□□□ -0.78
CLK3-206ENST00000562078 TENM4Q6N022 2769 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 ODF3BA8MYP8 253 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 ZFP36P26651 326 aaKnown RBP10.14□□□□□ -0.79
CLK3-206ENST00000562078 NRACQ8N912 160 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 CFHR4Q92496 578 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 A0A0J9YY99 117 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 PVRIGQ6DKI7 326 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 VMO1Q7Z5L0 202 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 LYPD1Q8N2G4 141 aa10.14□□□□□ -0.79
CLK3-206ENST00000562078 IGHV3-30P01768 117 aa10.13□□□□□ -0.79
CLK3-206ENST00000562078 IGHV3-30-5P0DP03 117 aa10.13□□□□□ -0.79
CLK3-206ENST00000562078 PLA2G2AP14555 144 aa10.13□□□□□ -0.79
CLK3-206ENST00000562078 HES1Q14469 280 aa10.13□□□□□ -0.79
CLK3-206ENST00000562078 ZNF56Q15929 161 aa10.13□□□□□ -0.79
CLK3-206ENST00000562078 NEXN-AS1Q8NBZ9 246 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 73.4 ms