RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 TMEM30BQ3MIR4 351 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 Q6ZT83 130 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 FAM216BQ8N7L0 139 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 C9orf106Q8NAJ2 232 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 RAI1Q7Z5J4 1906 aaPredicted RBP14.37□□□□□ -0.11
RAB40C-206ENST00000561781 A0A0J9YY99 117 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 OOSP1A8MZH6 123 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 LINC01620Q4KN68 170 aa14.37□□□□□ -0.11
RAB40C-206ENST00000561781 IGHV3-30P01768 117 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 IGHV3-30-5P0DP03 117 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 DTX2Q86UW9 622 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 CCL13Q99616 98 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 TRBV10-2A0A0K0K1G8 114 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 B9A039 149 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 TMEM219Q86XT9 240 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 NEXN-AS1Q8NBZ9 246 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 GAFA1Q96PS6 74 aa14.36□□□□□ -0.11
RAB40C-206ENST00000561781 MRPS12O15235 138 aaKnown RBP14.35□□□□□ -0.11
RAB40C-206ENST00000561781 SPRY3O43610 288 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 EMP1P54849 157 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 MRGPRG-AS1Q2M3A8 158 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 LINC00526Q96FQ7 95 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 CDSNQ15517 529 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 CRYBG3Q68DQ2 2970 aa14.35□□□□□ -0.11
RAB40C-206ENST00000561781 FAM236AA0A1B0GUQ0 79 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 FAM236BA0A1B0GV22 79 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 SHANK2-AS3Q9BTD1 123 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 ABCA1O95477 2261 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 IGHV1-18A0A0C4DH31 117 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 EBI3Q14213 229 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 CNEP1R1Q8N9A8 125 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 SCGB3A1Q96QR1 104 aa14.34□□□□□ -0.11
RAB40C-206ENST00000561781 CCL21O00585 134 aa14.33□□□□□ -0.12
RAB40C-206ENST00000561781 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.12
RAB40C-206ENST00000561781 IGHV3-33P01772 117 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 PDE6HQ13956 83 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 POM121L12Q8N7R1 296 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 SLC25A29Q8N8R3 303 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 NRACQ8N912 160 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 CTSZQ9UBR2 303 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 CD3EP07766 207 aa14.32□□□□□ -0.12
RAB40C-206ENST00000561781 NBPF19A0A087WUL8 3843 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 DCHS2Q6V1P9 2916 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 TRGV11A0A075B6L2 103 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 H3BRN7 92 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 IGLV1-44P01699 117 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 ATP5G1P05496 136 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 TNFAIP6P98066 277 aaPredicted RBP14.31□□□□□ -0.12
RAB40C-206ENST00000561781 TEX36Q5VZQ5 186 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 KLHL30-AS1Q8NEE0 82 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 A0A0G2JNJ9 132 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 HERVK_113P61574 105 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 PMVKQ15126 192 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 ORMDL2Q53FV1 153 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 ZNF575Q86XF7 245 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 Q9UFV3 132 aa14.31□□□□□ -0.12
RAB40C-206ENST00000561781 ORM1P02763 201 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 CCL3L1P16619 93 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 ADORA2A-AS1P86434 159 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 TOMM6Q96B49 74 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 RNF7Q9UBF6 113 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 PLA2G2AP14555 144 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 ZNF80P51504 273 aaPredicted RBP14.3□□□□□ -0.12
RAB40C-206ENST00000561781 IL17RELQ6ZVW7 336 aa14.3□□□□□ -0.12
RAB40C-206ENST00000561781 RPL27AP46776 148 aaKnown RBP14.29□□□□□ -0.12
RAB40C-206ENST00000561781 EDA2RQ9HAV5 297 aa14.29□□□□□ -0.12
RAB40C-206ENST00000561781 CSMD2Q7Z408 3487 aa14.29□□□□□ -0.12
RAB40C-206ENST00000561781 IGKV2-40A0A087WW87 121 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-206ENST00000561781 RBAKDNA6NC62 111 aa14.29□□□□□ -0.12
RAB40C-206ENST00000561781 IGKV2D-40P01614 121 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-206ENST00000561781 TMEM170BQ5T4T1 132 aa14.29□□□□□ -0.12
RAB40C-206ENST00000561781 ZNF474Q6S9Z5 364 aaPredicted RBP14.29□□□□□ -0.12
RAB40C-206ENST00000561781 C2orf82Q6UX34 121 aa14.29□□□□□ -0.12
RAB40C-206ENST00000561781 A0A0B4J2C4 111 aa14.28□□□□□ -0.12
RAB40C-206ENST00000561781 IGKV1-17P01599 117 aa14.28□□□□□ -0.12
RAB40C-206ENST00000561781 MFAP4P55083 255 aa14.28□□□□□ -0.12
RAB40C-206ENST00000561781 DOPEY1Q5JWR5 2465 aa14.28□□□□□ -0.12
RAB40C-206ENST00000561781 MBD3L4A6NDZ8 208 aaPredicted RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 MBD3L3A6NE82 208 aaPredicted RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 MBD3L5A6NJ08 208 aaPredicted RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 ENSAO43768 121 aaKnown RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 MBD3L2Q8NHZ7 208 aaPredicted RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 TMEM263Q8WUH6 116 aaKnown RBP14.27□□□□□ -0.12
RAB40C-206ENST00000561781 IGHV3-72A0A0B4J1Y9 119 aa14.27□□□□□ -0.13
RAB40C-206ENST00000561781 H3BT86 120 aa14.27□□□□□ -0.13
RAB40C-206ENST00000561781 DEFB121Q5J5C9 76 aa14.27□□□□□ -0.13
RAB40C-206ENST00000561781 Q8TAT8 98 aa14.27□□□□□ -0.13
RAB40C-206ENST00000561781 IGHV4-39P01824 125 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 PAPPA-AS1Q5QFB9 102 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 ZNRF2Q8NHG8 242 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 CENPEQ02224 2701 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 F5H768 121 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 ERCC8Q13216 396 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 Q6ZS46 218 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 C1orf162Q8NEQ5 155 aaPredicted RBP14.26□□□□□ -0.13
RAB40C-206ENST00000561781 SMIM2Q9BVW6 85 aa14.26□□□□□ -0.13
RAB40C-206ENST00000561781 CADP27708 2225 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 PSMG3-AS1Q96PY0 264 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 CNTFRP26992 372 aa14.25□□□□□ -0.13
RAB40C-206ENST00000561781 GRNP28799 593 aaKnown RBP14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms