RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 VAX2Q9UIW0 290 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 LINC00588Q9Y4M8 146 aa2.08□□□□□ -2.08
HERC1-215ENST00000561436 TIMM8BQ9Y5J9 83 aaPredicted RBP2.08□□□□□ -2.08
HERC1-215ENST00000561436 IGHV3OR16-8A0A075B7F1 116 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 PNMA8CA0A1B0GUJ8 204 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 C9JQL5 133 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 F5H768 121 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 NDUFS5O43920 106 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 IGLC1P0CG04 106 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 G6PCP35575 357 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 LPAR6P43657 344 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 GALR1P47211 349 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 EMP1P54849 157 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 SPCS3P61009 180 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 SUPT4H1P63272 117 aaKnown RBP2.07□□□□□ -2.08
HERC1-215ENST00000561436 FABP5Q01469 135 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 INSL4Q14641 139 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 PLECQ15149 4684 aaKnown RBP2.07□□□□□ -2.08
HERC1-215ENST00000561436 TAL2Q16559 108 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 PRR9Q5T870 116 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 LAIR2Q6ISS4 152 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 C10orf126Q8N4M7 172 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 FAM24BQ8N5W8 94 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 BPIFB6Q8NFQ5 453 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 MAFIPQ8WZ33 124 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 YIPF6Q96EC8 236 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 GNPNAT1Q96EK6 184 aaPredicted RBP2.07□□□□□ -2.08
HERC1-215ENST00000561436 TMEM208Q9BTX3 173 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 NDUFB11Q9NX14 153 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 DOK5Q9P104 306 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 ANAPC10Q9UM13 185 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 U3KQ87 197 aa2.07□□□□□ -2.08
HERC1-215ENST00000561436 IGHV3-21A0A0B4J1V1 117 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 TRAV5A0A0B4J249 113 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 A0A0J9YX75 114 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 TMEM235A6NFC5 223 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 A8MUU9 505 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 SNRPGP15A8MWD9 76 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 H7BYZ3 331 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 IGLV2-8P01709 118 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 RNASE2P10153 161 aaKnown RBP2.06□□□□□ -2.08
HERC1-215ENST00000561436 HTN3P15516 51 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 NTF3P20783 257 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 OR10J1P30954 320 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 CLDN12P56749 244 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 PMVKQ15126 192 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 FAM78BQ5VT40 261 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 PP632Q6XCG6 107 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 Q6ZRN7 208 aaPredicted RBP2.06□□□□□ -2.08
HERC1-215ENST00000561436 ZNF767PQ75MW2 155 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 TMEM144Q7Z5S9 345 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 C1orf158Q8N1D5 194 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 MIR7-3HGQ8N6C7 128 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 OR5H2Q8NGV7 314 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 S100A16Q96FQ6 103 aaKnown RBP2.06□□□□□ -2.08
HERC1-215ENST00000561436 MAP1LC3CQ9BXW4 147 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 SH3BGRL3Q9H299 93 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 CTNNBIP1Q9NSA3 81 aaPredicted RBP2.06□□□□□ -2.08
HERC1-215ENST00000561436 PRO0628Q9UI54 55 aa2.06□□□□□ -2.08
HERC1-215ENST00000561436 A0A087WTM6 91 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 RAB19A4D1S5 217 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 GABARAPH6UMI1 98 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 J3QRK9 145 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 RGS5O15539 181 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 APOA1P02647 267 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 RLN2P04090 185 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 IGLV7-43P04211 117 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 CXCL2P19875 107 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 TAS2R20P59543 309 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 FXYD4P59646 89 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 TSPAN5P62079 268 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 POLR2GP62487 172 aaKnown RBP eCLIP2.05□□□□□ -2.08
HERC1-215ENST00000561436 SURF2Q15527 256 aaPredicted RBP2.05□□□□□ -2.08
HERC1-215ENST00000561436 ESRGQ1W209 222 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 ACOT6Q3I5F7 207 aaPredicted RBP2.05□□□□□ -2.08
HERC1-215ENST00000561436 SP6Q3SY56 376 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 AMTNQ6UX39 209 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 FAM231DQ6ZW35 169 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 OR4B1Q8NGF8 309 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 TMEM263Q8WUH6 116 aaKnown RBP2.05□□□□□ -2.08
HERC1-215ENST00000561436 LINC00052Q96N35 136 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 LINC00467Q9BRT7 94 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 IFT46Q9NQC8 304 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 SSR3Q9UNL2 185 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 FRAS1Q86XX4 4008 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 DNAH11Q96DT5 4516 aa2.05□□□□□ -2.08
HERC1-215ENST00000561436 C3orf85A0A1B0GTC6 90 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 SPRR5A0A1B0GTR4 108 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 BOLA2-SMG1P6H3BVE0 249 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 CRXO43186 299 aaPredicted RBP2.04□□□□□ -2.08
HERC1-215ENST00000561436 CDS2O95674 445 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 NMBP08949 121 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 DEFB130BP0DP73 79 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 DEFB130AP0DP74 79 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 RPL7P18124 248 aaKnown RBP2.04□□□□□ -2.08
HERC1-215ENST00000561436 EVI2AP22794 236 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 HLA-DMAP28067 261 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 RCVRNP35243 200 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 KRTAP13-2Q52LG2 175 aa2.04□□□□□ -2.08
HERC1-215ENST00000561436 NMSQ5H8A3 153 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 217.8 ms