RNA–Protein interactions for RNA: ENST00000561393.5

AP4E1-205, Transcript of adaptor related protein complex 4 subunit epsilon 1, humanhuman

TSL 1 (best)

Gene AP4E1, Length 4,024 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP4E1-205ENST00000561393 ATMQ13315 3056 aa12.46□□□□□ -0.41
AP4E1-205ENST00000561393 Q6YL49 198 aa12.46□□□□□ -0.41
AP4E1-205ENST00000561393 INSP01308 110 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 ZNF415Q09FC8 603 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 ZC2HC1BQ5TFG8 222 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 CBY1Q9Y3M2 126 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 SCGB1C2P0DMR2 95 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 APRG1Q8IVJ8 170 aa12.46□□□□□ -0.42
AP4E1-205ENST00000561393 PAPPA-AS1Q5QFB9 102 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 TEX43Q6ZNM6 134 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 MRAP2Q96G30 205 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 CHTOPQ9Y3Y2 248 aaKnown RBP12.45□□□□□ -0.42
AP4E1-205ENST00000561393 CCL24O00175 119 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 PIFOQ8TCI5 191 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 DMDP11532 3685 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 VCYO14598 125 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 IGLC3P0DOY3 106 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 Q8N8P6 123 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 TP53TG3Q9ULZ0 132 aa12.45□□□□□ -0.42
AP4E1-205ENST00000561393 UBE2L6O14933 153 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 RIPPLY3P57055 190 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 CD300EQ496F6 205 aaPredicted RBP12.44□□□□□ -0.42
AP4E1-205ENST00000561393 LRRC75A-AS1Q8N1F1 130 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 OR9G4Q8NGQ1 327 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 GEMIN7Q9H840 131 aaKnown RBP12.44□□□□□ -0.42
AP4E1-205ENST00000561393 IGKV3D-20A0A0C4DH25 116 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 PRSS2P07478 247 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 VCX2Q9H322 139 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 LGALS3P17931 250 aaKnown RBP12.44□□□□□ -0.42
AP4E1-205ENST00000561393 MPV17L2Q567V2 206 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 C20orf173Q96LM9 149 aa12.44□□□□□ -0.42
AP4E1-205ENST00000561393 ZNF747Q9BV97 191 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 SNHG12Q9BXW3 62 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 CTRLP40313 264 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 FOXI2Q6ZQN5 318 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 SMIM2Q9BVW6 85 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 RNF114Q9Y508 228 aa12.43□□□□□ -0.42
AP4E1-205ENST00000561393 IGHV3-16A0A0C4DH30 117 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 CLPSL1A2RUU4 121 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 C2orf66Q6UXQ4 117 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 TMEM61Q8N0U2 210 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 TRAV8-2A0A0B4J237 113 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 SDHAF1A6NFY7 115 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 MRPS12O15235 138 aaKnown RBP12.42□□□□□ -0.42
AP4E1-205ENST00000561393 KIR3DS1Q14943 382 aa12.42□□□□□ -0.42
AP4E1-205ENST00000561393 DNAJC9-AS1A6NH13 148 aa12.41□□□□□ -0.42
AP4E1-205ENST00000561393 PHLDA1Q8WV24 401 aaPredicted RBP12.41□□□□□ -0.42
AP4E1-205ENST00000561393 TMEM89A2RUT3 159 aa12.4□□□□□ -0.42
AP4E1-205ENST00000561393 ESDP10768 282 aa12.4□□□□□ -0.42
AP4E1-205ENST00000561393 RPL39LQ96EH5 51 aaKnown RBP12.4□□□□□ -0.42
AP4E1-205ENST00000561393 GTF2H5Q6ZYL4 71 aa12.4□□□□□ -0.42
AP4E1-205ENST00000561393 IGHV3-64A0A075B6Q5 118 aa12.4□□□□□ -0.43
AP4E1-205ENST00000561393 TRGV4A0A0C4DH28 118 aa12.4□□□□□ -0.43
AP4E1-205ENST00000561393 CD28P10747 220 aa12.4□□□□□ -0.43
AP4E1-205ENST00000561393 PSMB8P28062 276 aa12.4□□□□□ -0.43
AP4E1-205ENST00000561393 COTL1Q14019 142 aa12.4□□□□□ -0.43
AP4E1-205ENST00000561393 GAGE10A6NGK3 116 aa12.39□□□□□ -0.43
AP4E1-205ENST00000561393 DLX4Q92988 240 aaPredicted RBP12.39□□□□□ -0.43
AP4E1-205ENST00000561393 TSSC4Q9Y5U2 329 aaPredicted RBP12.39□□□□□ -0.43
AP4E1-205ENST00000561393 TP53TG1Q9Y2A0 90 aa12.39□□□□□ -0.43
AP4E1-205ENST00000561393 H7C2G1 150 aa12.39□□□□□ -0.43
AP4E1-205ENST00000561393 DKK2Q9UBU2 259 aa12.39□□□□□ -0.43
AP4E1-205ENST00000561393 CFAP46Q8IYW2 2715 aa12.38□□□□□ -0.43
AP4E1-205ENST00000561393 HTN3P15516 51 aa12.38□□□□□ -0.43
AP4E1-205ENST00000561393 CITED2Q99967 270 aaPredicted RBP12.38□□□□□ -0.43
AP4E1-205ENST00000561393 PSMB2P49721 201 aa12.38□□□□□ -0.43
AP4E1-205ENST00000561393 VPS25Q9BRG1 176 aa12.38□□□□□ -0.43
AP4E1-205ENST00000561393 USP24Q9UPU5 2620 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 IGLC6P0CF74 106 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 ZZEF1O43149 2961 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 IGLV1-40P01703 118 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 CMC4P56277 68 aaPredicted RBP12.37□□□□□ -0.43
AP4E1-205ENST00000561393 CFHR3Q02985 330 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 C19orf54Q5BKX5 351 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 Q8N1Y9 231 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 EDN2P20800 178 aa12.37□□□□□ -0.43
AP4E1-205ENST00000561393 MRPL35Q9NZE8 188 aaKnown RBP12.37□□□□□ -0.43
AP4E1-205ENST00000561393 KIR2DL5BA0A0G2JN68 375 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 KIR2DL5BA0A0G2JPC4 375 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 A0A0J9YX75 114 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 TMEM262E9PQX1 116 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 RPL24P83731 157 aaKnown RBP12.36□□□□□ -0.43
AP4E1-205ENST00000561393 KIR2DL5AQ8N109 375 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 C2orf88Q9BSF0 95 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 JPT2Q9H910 190 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 LOC107984156A0A0G2JMH3 177 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 TRPT1Q86TN4 253 aaKnown RBP12.36□□□□□ -0.43
AP4E1-205ENST00000561393 ARL17AQ8IVW1 177 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 ZNF702PQ9H963 129 aa12.36□□□□□ -0.43
AP4E1-205ENST00000561393 NAA38Q9BRA0 125 aaKnown RBP12.36□□□□□ -0.43
AP4E1-205ENST00000561393 NHP2Q9NX24 153 aaKnown RBP12.36□□□□□ -0.43
AP4E1-205ENST00000561393 ZNF815PA8K554 130 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 SMAGPQ0VAQ4 97 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 Q6ZQT7 251 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 MRPL16Q9NX20 251 aaKnown RBP12.35□□□□□ -0.43
AP4E1-205ENST00000561393 TMEM238LA0A1B0GVL6 79 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 A6NJY4 79 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 LGALS9BQ3B8N2 356 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 LGALS9CQ6DKI2 356 aa12.35□□□□□ -0.43
AP4E1-205ENST00000561393 ZNF493Q6ZR52 646 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms