RNA–Protein interactions for RNA: ENST00000561253.5

LRRC28-220, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-220ENST00000561253 ALKAL2Q6UX46 152 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 C1orf158Q8N1D5 194 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 SFT2D1Q8WV19 159 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 CHCHD5Q9BSY4 110 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 EDA2RQ9HAV5 297 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 RYR2Q92736 4967 aa4.24□□□□□ -1.73
LRRC28-220ENST00000561253 TRAV8-1A0A0A6YYK1 113 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 TRBV7-9A0A0J9YWB2 115 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 PLAC8L1A1L4L8 177 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 EPM2AB3EWF7 344 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 ZNF324O75467 553 aaPredicted RBP4.23□□□□□ -1.73
LRRC28-220ENST00000561253 TCRAP04437 139 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 NMBP08949 121 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 NDUFV3P56181 108 aaKnown RBP4.23□□□□□ -1.73
LRRC28-220ENST00000561253 GNG5P63218 68 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 SPINK13Q1W4C9 94 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 PRR9Q5T870 116 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 TEX261Q6UWH6 196 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 Q6ZQT7 251 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 Q8NAQ8 132 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 C5orf17Q8NAS9 161 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 OR4B1Q8NGF8 309 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 LRRC20Q8TCA0 184 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 PCNPQ8WW12 178 aaKnown RBP4.23□□□□□ -1.73
LRRC28-220ENST00000561253 C11orf52Q96A22 123 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 IGF2BP2-AS1Q96M15 143 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 LINC00477Q96M19 166 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 RCHY1Q96PM5 261 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 XCL2Q9UBD3 114 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 KLF12Q9Y4X4 402 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 DNAH2Q9P225 4427 aa4.23□□□□□ -1.73
LRRC28-220ENST00000561253 TRAV12-2A0A075B6T6 113 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 KRTAP16-1A8MUX0 517 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 ATP5G3P48201 142 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 ZNF138P52744 262 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 FXYD7P58549 80 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 IFITM2Q01629 132 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 GOLT1AQ6ZVE7 132 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 ZNF680Q8NEM1 530 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 OR10J6PQ8NGY7 276 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 Q8TAT8 98 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 RXFP4Q8TDU9 374 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 ZNF492Q9P255 531 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 EPDR1Q9UM22 224 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 LENEPQ9Y5L5 61 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 U3KQK5 164 aa4.22□□□□□ -1.73
LRRC28-220ENST00000561253 DNAH10Q8IVF4 4471 aa4.21□□□□□ -1.73
LRRC28-220ENST00000561253 TRBV6-1A0A0K0K1D8 114 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 A0A1B0GV50 99 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 SERTM2A0A1B0GWG4 89 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 PEX7O00628 323 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 PRM2P04554 102 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 CDKN1BP46527 198 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 UBE2G2P60604 165 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 NUTF2P61970 127 aaKnown RBP4.21□□□□□ -1.74
LRRC28-220ENST00000561253 HERV-K104P63124 156 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 MUC21Q5SSG8 566 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 Q6AWC8 147 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 CYB561D1Q8N8Q1 229 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM75Q8N9X5 138 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 OR11H2Q8NH07 326 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 LINC00467Q9BRT7 94 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 TCEAL7Q9BRU2 100 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 OCR1Q9BZK8 76 aa4.21□□□□□ -1.74
LRRC28-220ENST00000561253 NKX6-2Q9C056 277 aaPredicted RBP4.21□□□□□ -1.74
LRRC28-220ENST00000561253 C11orf68Q9H3H3 251 aaKnown RBP4.21□□□□□ -1.74
LRRC28-220ENST00000561253 TRBV20OR9-2A0A075B6H5 130 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 INSP01308 110 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 HBE1P02100 147 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 BCL2P10415 239 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 TSPOP30536 169 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 CSN1S1P47710 185 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 PPT1P50897 306 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 ZNF80P51504 273 aaPredicted RBP4.2□□□□□ -1.74
LRRC28-220ENST00000561253 RIGQ13278 110 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 BTN1A1Q13410 526 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 Q86TA4 180 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 IQCF2Q8IXL9 164 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 HIST1H2BAQ96A08 127 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 RARRES2Q99969 163 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 C20orf144Q9BQM9 153 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 MANBALQ9NQG1 85 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 GNG13Q9P2W3 67 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 PSG8Q9UQ74 426 aa4.2□□□□□ -1.74
LRRC28-220ENST00000561253 HYDINQ4G0P3 5121 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 C7orf71A4D174 169 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 SMIM9A6NGZ8 99 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 C11orf94C9JXX5 98 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 NDUFS6O75380 124 aaKnown RBP4.19□□□□□ -1.74
LRRC28-220ENST00000561253 LTAP01374 205 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 IGLV2-8P01709 118 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 MIFP14174 115 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 AZU1P20160 251 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 LEPP41159 167 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 CRIP1P50238 77 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 TAS2R60P59551 318 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 FLI1Q01543 452 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-220ENST00000561253 MEF2BQ02080 365 aaPredicted RBP4.19□□□□□ -1.74
LRRC28-220ENST00000561253 TDRG1Q3Y452 100 aa4.19□□□□□ -1.74
LRRC28-220ENST00000561253 TMEM78Q5T7P6 136 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms