RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 IQCJQ1A5X6 159 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 SPHKAPQ2M3C7 1700 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 FREM1Q5H8C1 2179 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 PRR9Q5T870 116 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 SPANXN1Q5VSR9 72 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 C10orf71Q711Q0 1435 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 LYPD1Q8N2G4 141 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 LCN9Q8WX39 176 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 TMEM141Q96I45 108 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 TIMM21Q9BVV7 248 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 HEATR1Q9H583 2144 aaKnown RBP1.7□□□□□ -2.14
USP8-217ENST00000561211 SHROOM3Q8TF72 1996 aa1.7□□□□□ -2.14
USP8-217ENST00000561211 MAGI1Q96QZ7 1491 aaPredicted RBP1.69□□□□□ -2.14
USP8-217ENST00000561211 MGAMO43451 1857 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 KIAA1551Q9HCM1 1747 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 A0A1W2PNN7 141 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 FAM24AA6NFZ4 105 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 SSSCA1O60232 199 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 DCDP81605 110 aaKnown RBP1.69□□□□□ -2.14
USP8-217ENST00000561211 PRO1933Q9H354 126 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 Q9H521 79 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 TMEM106BQ9NUM4 274 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 CASZ1Q86V15 1759 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 PTPRMP28827 1452 aa1.69□□□□□ -2.14
USP8-217ENST00000561211 MPDZO75970 2070 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 AKAP12Q02952 1782 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 CCKP06307 115 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 LINC00032P0C843 101 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 SLC25A6P12236 298 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 PIPP12273 146 aaPredicted RBP1.68□□□□□ -2.14
USP8-217ENST00000561211 C9orf116Q5BN46 136 aaPredicted RBP1.68□□□□□ -2.14
USP8-217ENST00000561211 C2orf82Q6UX34 121 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 CLECL1Q8IZS7 167 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 OR10AG1Q8NH19 301 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 CMTM2Q8TAZ6 248 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 PPDPFLQ8WWR9 84 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 NPVFQ9HCQ7 196 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 ANKRD26Q9UPS8 1709 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 IFT140Q96RY7 1462 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 ALPK2Q86TB3 2170 aa1.68□□□□□ -2.14
USP8-217ENST00000561211 ROBO1Q9Y6N7 1651 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 ARHGAP5Q13017 1502 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 MUC19Q7Z5P9 8384 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 UBE2L5PA0A1B0GUS4 154 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 H3BQF6 201 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 SNCGO76070 127 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 RNASE2P10153 161 aaKnown RBP1.67□□□□□ -2.14
USP8-217ENST00000561211 CBLN1P23435 193 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 UBE2G1P62253 170 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 UBE2L3P68036 154 aaKnown RBP1.67□□□□□ -2.14
USP8-217ENST00000561211 RHOHQ15669 191 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 COMMD6Q7Z4G1 85 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 PATE1Q8WXA2 126 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 VAMP8Q9BV40 100 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 LINC00474Q9P2X8 69 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 MYLKQ15746 1914 aa1.67□□□□□ -2.14
USP8-217ENST00000561211 RBBP6Q7Z6E9 1792 aaKnown RBP1.67□□□□□ -2.14
USP8-217ENST00000561211 MDC1Q14676 2089 aaKnown RBP1.67□□□□□ -2.14
USP8-217ENST00000561211 CPSF1Q10570 1443 aaKnown RBP1.66□□□□□ -2.14
USP8-217ENST00000561211 DCAF1Q9Y4B6 1507 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 CCL16O15467 120 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 ATP5EP56381 51 aaPredicted RBP1.66□□□□□ -2.14
USP8-217ENST00000561211 RBM3P98179 157 aaKnown RBP1.66□□□□□ -2.14
USP8-217ENST00000561211 SLC48A1Q6P1K1 146 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 LINC00052Q96N35 136 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 PLXNA4Q9HCM2 1894 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 LRP5O75197 1615 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 DISP1Q96F81 1524 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 RTEL1-TNFRSF6BF6WH68 1400 aa1.66□□□□□ -2.14
USP8-217ENST00000561211 KDM5AP29375 1690 aaKnown RBP1.65□□□□□ -2.15
USP8-217ENST00000561211 ADAMTS7Q9UKP4 1686 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 GAPVD1Q14C86 1478 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 CCDC18Q5T9S5 1454 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 A0A0J9YY99 117 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 RNASE3P12724 160 aaKnown RBP1.65□□□□□ -2.15
USP8-217ENST00000561211 IL7P13232 177 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 ELOBQ15370 118 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 CSAG1Q6PB30 78 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 LYPD5Q6UWN5 251 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 ZNF431Q8TF32 576 aaPredicted RBP1.65□□□□□ -2.15
USP8-217ENST00000561211 MRPL35Q9NZE8 188 aaKnown RBP1.65□□□□□ -2.15
USP8-217ENST00000561211 C22orf24Q9Y442 160 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 ZSWIM8A7E2V4 1837 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 DAPK1P53355 1430 aa1.65□□□□□ -2.15
USP8-217ENST00000561211 LAMB4A4D0S4 1761 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 FYCO1Q9BQS8 1478 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 COL4A2P08572 1712 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 IGLV6-57P01721 117 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 TDRG1Q3Y452 100 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 S100A7L2Q5SY68 101 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 NDUFA11Q86Y39 141 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 TSLPQ969D9 159 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 ODF3Q96PU9 254 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 ATG5Q9H1Y0 275 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 SDK1Q7Z5N4 2213 aa1.64□□□□□ -2.15
USP8-217ENST00000561211 PHIPQ8WWQ0 1821 aa1.63□□□□□ -2.15
USP8-217ENST00000561211 SIPA1L2Q9P2F8 1722 aaPredicted RBP1.63□□□□□ -2.15
USP8-217ENST00000561211 ANKRD36BQ8N2N9 1353 aa1.63□□□□□ -2.15
USP8-217ENST00000561211 CHD3Q12873 2000 aaKnown RBP1.63□□□□□ -2.15
USP8-217ENST00000561211 LAMB2P55268 1798 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms