RNA–Protein interactions for RNA: ENST00000561128.1

CHRNA3-208, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-208ENST00000561128 A0A1W2PPQ1 181 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 FBLL1A6NHQ2 334 aaKnown RBP8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 LTAP01374 205 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 DNAH10OSP0CZ25 163 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 CCL20P78556 96 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 SLAQ13239 276 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 UFSP1Q6NVU6 142 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 COX8CQ7Z4L0 72 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 Q8N3U1 123 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 SFT2D1Q8WV19 159 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 MBD3L1Q8WWY6 194 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 HIST1H2BAQ96A08 127 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 PARLQ9H300 379 aa8.58□□□□□ -1.04
CHRNA3-208ENST00000561128 TMSB15BA0A087X1C1 80 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 A0A0D9SG52 128 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 KANTRA0A1W2PQU2 76 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 C16orf90A8MZG2 172 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 B4DEV8 164 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 LINC00694P0DN24 101 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 MED14OSP0DP75 135 aa8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 RPL19P84098 196 aaKnown RBP8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 PCNPQ8WW12 178 aaKnown RBP8.57□□□□□ -1.04
CHRNA3-208ENST00000561128 TRBV6-1A0A0K0K1D8 114 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 FABP5P3A8MUU1 101 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 ORM1P02763 201 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 ASIPP42127 132 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 AKR1C3P42330 323 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 PPT1P50897 306 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 ZNF674Q2M3X9 581 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 LGALSLQ3ZCW2 172 aaPredicted RBP8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 DMRTA1Q5VZB9 504 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 C14orf178Q8N769 122 aaPredicted RBP8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 PTH2Q96A98 100 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 FMC1Q96HJ9 113 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 DERL1Q9BUN8 251 aa8.56□□□□□ -1.04
CHRNA3-208ENST00000561128 STOML3Q8TAV4 291 aa8.55□□□□□ -1.04
CHRNA3-208ENST00000561128 TRBV6-4A0A1B0GX49 114 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 UMAD1C9J7I0 102 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 ARMS2P0C7Q2 107 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 UBE2G1P62253 170 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 LINC01559Q495D7 138 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 DNLZQ5SXM8 178 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 FAM162BQ5T6X4 162 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 Q6ZNX1 250 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 TCTE3Q8IZS6 198 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 TXNDC17Q9BRA2 123 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 NKX6-2Q9C056 277 aaPredicted RBP8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 SCRT2Q9NQ03 307 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 IL36BQ9NZH7 164 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 ZFP30Q9Y2G7 519 aa8.54□□□□□ -1.04
CHRNA3-208ENST00000561128 hCG_2014768A0A024R1R8 64 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 PFDN1O60925 122 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 H2AFB1P0C5Y9 115 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 TPT1P13693 172 aaKnown RBP8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 BTF3P20290 206 aaKnown RBP8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 S100A4P26447 101 aaKnown RBP8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 RHOHQ15669 191 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 MLST8Q9BVC4 326 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 LY96Q9Y6Y9 160 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 RYR1P21817 5038 aa8.53□□□□□ -1.04
CHRNA3-208ENST00000561128 A0A087WWL8 130 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GAGE12JA6NER3 117 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 TIRAPP58753 221 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GAGE1Q13065 139 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GAGE4Q13068 117 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GAGE5Q13069 117 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GAGE13Q4V321 117 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 GNG13Q9P2W3 67 aa8.52□□□□□ -1.05
CHRNA3-208ENST00000561128 PCLOQ9Y6V0 5065 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 LRP1BQ9NZR2 4599 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 MUC21A0A0G2JKD1 596 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 MUC21A0A140T8X8 626 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 M0R381 172 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 CRYGDP07320 174 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 MGST1P10620 155 aaKnown RBP8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 OR10AG1Q8NH19 301 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 C11orf52Q96A22 123 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 TCEAL7Q9BRU2 100 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 PRADC1Q9BSG0 188 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 MSRB1Q9NZV6 116 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 HSPG2P98160 4391 aa8.51□□□□□ -1.05
CHRNA3-208ENST00000561128 IGHV3-38A0A0C4DH36 116 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 A8MWV9 139 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 IGLV2-8P01709 118 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 IGHV3-30P01768 117 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 IGHV3-33P01772 117 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 IGHV3-30-3P0DP02 117 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 IGHV3-30-5P0DP03 117 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 SULT1A2P50226 295 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 FAM74A4Q5TZK3 123 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 PRR27Q6MZM9 219 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 ATP6V0E2Q8NHE4 81 aa8.5□□□□□ -1.05
CHRNA3-208ENST00000561128 TRBV20OR9-2A0A075B6H5 130 aa8.49□□□□□ -1.05
CHRNA3-208ENST00000561128 A0A087WTM6 91 aa8.49□□□□□ -1.05
CHRNA3-208ENST00000561128 TRAV1-1A0A0B4J248 108 aa8.49□□□□□ -1.05
CHRNA3-208ENST00000561128 C1QBP02746 253 aa8.49□□□□□ -1.05
CHRNA3-208ENST00000561128 RPL35P42766 123 aaKnown RBP8.49□□□□□ -1.05
CHRNA3-208ENST00000561128 LINC01556Q5JQF7 62 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms