RNA–Protein interactions for RNA: ENST00000560962.5

USP3-AS1-208, USP3 antisense RNA 1, humanhuman

TSL 2

Gene USP3-AS1, Length 1,807 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-AS1-208ENST00000560962 RBMY1CP0DJD4 496 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 RBMY1FQ15415 496 aaKnown RBP13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 DNLZQ5SXM8 178 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 STHQ8IWL8 128 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 WFDC9Q8NEX5 89 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 PACRGQ96M98 296 aaPredicted RBP13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 PHLDA3Q9Y5J5 127 aa13.11□□□□□ -0.31
USP3-AS1-208ENST00000560962 IGHV4-4A0A075B6R2 117 aa13.1□□□□□ -0.31
USP3-AS1-208ENST00000560962 IGHV1OR15-1A0A075B7D0 117 aa13.1□□□□□ -0.31
USP3-AS1-208ENST00000560962 EVI2AP22794 236 aa13.1□□□□□ -0.31
USP3-AS1-208ENST00000560962 FBN1P35555 2871 aaKnown RBP13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 D6R8Y8 96 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 MED14OSP0DP75 135 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 TDRG1Q3Y452 100 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 TMEM18Q96B42 140 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 RNF185Q96GF1 192 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 SCRT2Q9NQ03 307 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 C19orf73Q9NVV2 129 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 SMKR1H3BMG3 65 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 ESDP10768 282 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 RAB4AP20338 218 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 LINC00518Q8N0U6 118 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 MCRIP2Q9BUT9 160 aaKnown RBP13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 WFDC10AQ9H1F0 79 aa13.09□□□□□ -0.31
USP3-AS1-208ENST00000560962 DMRTA1Q5VZB9 504 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 SHISA2Q6UWI4 295 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 SMIM15Q7Z3B0 74 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 Q8N1Y9 231 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 TMEM158Q8WZ71 300 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
USP3-AS1-208ENST00000560962 IGHV3-16A0A0C4DH30 117 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 NCR2O95944 276 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 RNASEKQ6P5S7 137 aaKnown RBP13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 NIT1Q86X76 327 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 SAMD10Q9BYL1 202 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 U3KQK5 164 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 MUC4Q99102 2169 aa13.07□□□□□ -0.32
USP3-AS1-208ENST00000560962 HTN1P15515 57 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 CKS2P33552 79 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 C12orf54Q6X4T0 127 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 TRPT1Q86TN4 253 aaKnown RBP13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 ORMDL3Q8N138 153 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 PRELID3AQ96N28 172 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 VWFP04275 2813 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 PMCHP20382 165 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 URB1-AS1Q96HZ7 61 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 XCL2Q9UBD3 114 aa13.06□□□□□ -0.32
USP3-AS1-208ENST00000560962 CBY3A6NI87 242 aa13.05□□□□□ -0.32
USP3-AS1-208ENST00000560962 PRM2P04554 102 aa13.05□□□□□ -0.32
USP3-AS1-208ENST00000560962 C12orf57Q99622 126 aa13.05□□□□□ -0.32
USP3-AS1-208ENST00000560962 GAS8-AS1O95177 125 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 WIPF1O43516 503 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 INSP01308 110 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 AMTP48728 403 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 C14orf178Q8N769 122 aaPredicted RBP13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 C9orf85Q96MD7 179 aa13.04□□□□□ -0.32
USP3-AS1-208ENST00000560962 TRGV11A0A075B6L2 103 aa13.03□□□□□ -0.32
USP3-AS1-208ENST00000560962 LOC389332A0A1B0GUA5 103 aa13.03□□□□□ -0.32
USP3-AS1-208ENST00000560962 NPYP01303 97 aa13.03□□□□□ -0.32
USP3-AS1-208ENST00000560962 GATA1P15976 413 aaPredicted RBP13.03□□□□□ -0.32
USP3-AS1-208ENST00000560962 LINC01587Q99440 93 aa13.03□□□□□ -0.32
USP3-AS1-208ENST00000560962 HSBP1O75506 76 aa13.02□□□□□ -0.32
USP3-AS1-208ENST00000560962 NXPH4O95158 308 aa13.02□□□□□ -0.32
USP3-AS1-208ENST00000560962 SMIM6P0DI80 62 aa13.02□□□□□ -0.32
USP3-AS1-208ENST00000560962 PYY3Q5JQD4 70 aa13.02□□□□□ -0.32
USP3-AS1-208ENST00000560962 TRAV26-2A0A0B4J265 109 aa13.02□□□□□ -0.33
USP3-AS1-208ENST00000560962 LINC00614P0C842 121 aa13.02□□□□□ -0.33
USP3-AS1-208ENST00000560962 RPL35AP18077 110 aaKnown RBP13.02□□□□□ -0.33
USP3-AS1-208ENST00000560962 NUTF2P61970 127 aaKnown RBP13.02□□□□□ -0.33
USP3-AS1-208ENST00000560962 C20orf144Q9BQM9 153 aa13.02□□□□□ -0.33
USP3-AS1-208ENST00000560962 NOTCH3Q9UM47 2321 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 PPBPP02775 128 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 IGLL1P15814 213 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 GTSCR1Q86UQ5 136 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 DPH3P1Q9H4G8 78 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 JPT2Q9H910 190 aa13.01□□□□□ -0.33
USP3-AS1-208ENST00000560962 PMCHL1Q16048 86 aa13□□□□□ -0.33
USP3-AS1-208ENST00000560962 PRSS3P2Q8NHM4 247 aa13□□□□□ -0.33
USP3-AS1-208ENST00000560962 AP1S3Q96PC3 154 aa13□□□□□ -0.33
USP3-AS1-208ENST00000560962 MGPP08493 103 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 IFI27P40305 119 aaPredicted RBP12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 Q6ZWC4 215 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 DEFB125Q8N687 156 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 CHCHD1Q96BP2 118 aaKnown RBP12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 IGHV3OR16-12A0A075B7B8 117 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 TNFRSF6BO95407 300 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 TMEM208Q9BTX3 173 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 TRRAPQ9Y4A5 3859 aa12.99□□□□□ -0.33
USP3-AS1-208ENST00000560962 FA2HQ7L5A8 372 aa12.98□□□□□ -0.33
USP3-AS1-208ENST00000560962 C1orf158Q8N1D5 194 aa12.98□□□□□ -0.33
USP3-AS1-208ENST00000560962 SYT8Q8NBV8 401 aa12.98□□□□□ -0.33
USP3-AS1-208ENST00000560962 LINC00467Q9BRT7 94 aa12.98□□□□□ -0.33
USP3-AS1-208ENST00000560962 CDPF1Q6NVV7 123 aa12.97□□□□□ -0.33
USP3-AS1-208ENST00000560962 A0A087WWL8 130 aa12.97□□□□□ -0.33
USP3-AS1-208ENST00000560962 GIG44P09565 113 aaPredicted RBP12.97□□□□□ -0.33
USP3-AS1-208ENST00000560962 SMIM17P0DL12 118 aa12.97□□□□□ -0.33
USP3-AS1-208ENST00000560962 MORN3Q6PF18 240 aaPredicted RBP12.97□□□□□ -0.33
USP3-AS1-208ENST00000560962 MAP1LC3AQ9H492 121 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms