RNA–Protein interactions for RNA: ENST00000560679.1

TPM1-225, Transcript of tropomyosin 1, humanhuman

TSL 3

Gene TPM1, Length 292 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-225ENST00000560679 INSP01308 110 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 IGLV2-8P01709 118 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 SLC25A5P05141 298 aaKnown RBP6.8□□□□□ -1.32
TPM1-225ENST00000560679 NBEAP1P0C6P0 100 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 TRGC1P0CF51 173 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 DNAH10OSP0CZ25 163 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 HIST1H1EP10412 219 aaKnown RBP6.8□□□□□ -1.32
TPM1-225ENST00000560679 HOXA5P20719 270 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 C5orf17Q8NAS9 161 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 BLNKQ8WV28 456 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 OTORQ9NRC9 128 aa6.8□□□□□ -1.32
TPM1-225ENST00000560679 S100A9P06702 114 aaKnown RBP6.79□□□□□ -1.32
TPM1-225ENST00000560679 NDUFA6P56556 154 aa6.79□□□□□ -1.32
TPM1-225ENST00000560679 ERVFC1-1P60608 527 aa6.79□□□□□ -1.32
TPM1-225ENST00000560679 RANP62826 216 aaKnown RBP6.79□□□□□ -1.32
TPM1-225ENST00000560679 EPDR1Q9UM22 224 aa6.79□□□□□ -1.32
TPM1-225ENST00000560679 RNF24Q9Y225 148 aa6.79□□□□□ -1.32
TPM1-225ENST00000560679 V9GYV3 84 aa6.79□□□□□ -1.32
TPM1-225ENST00000560679 TRAV12-2A0A075B6T6 113 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 A0A0J9YY99 117 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 PGPA6NDG6 321 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 SLC17A3O00476 420 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 SMIM6P0DI80 62 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 MGST1P10620 155 aaKnown RBP6.78□□□□□ -1.32
TPM1-225ENST00000560679 UBE2G1P62253 170 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 GNG5P63218 68 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 OR5I1Q13606 314 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 TMEM183BQ1AE95 376 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 C1orf194Q5T5A4 169 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 FAM231DQ6ZW35 169 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 BAGE2Q86Y30 109 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 BPIFA4PQ86YQ2 179 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 SMIM12Q96EX1 92 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 KLF12Q9Y4X4 402 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 PKHD1L1Q86WI1 4243 aa6.78□□□□□ -1.32
TPM1-225ENST00000560679 ZNF98A6NK75 572 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 KRTAP29-1A8MX34 341 aaPredicted RBP6.77□□□□□ -1.33
TPM1-225ENST00000560679 FAM229AH3BQW9 127 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 H3BTX0 84 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 IGLC2P0DOY2 106 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 MEOX2P50222 304 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 LINC00612Q8N6U2 182 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 RNASE8Q8TDE3 154 aaKnown RBP6.77□□□□□ -1.33
TPM1-225ENST00000560679 FMC1Q96HJ9 113 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 C16orf92Q96LL3 132 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 NOP10Q9NPE3 64 aaKnown RBP6.77□□□□□ -1.33
TPM1-225ENST00000560679 TNFRSF18Q9Y5U5 241 aa6.77□□□□□ -1.33
TPM1-225ENST00000560679 TRBV19A0A075B6N1 114 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 A0A087WTM6 91 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 TRAV34A0A0B4J273 112 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 TRBV6-1A0A0K0K1D8 114 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 MRPS12O15235 138 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 GATCO43716 136 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 TCRAP04437 139 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 SNRPCP09234 159 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 S100A7P31151 101 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 RPL19P84098 196 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 COA6Q5JTJ3 125 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 IBA57Q5T440 356 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 SAMD13Q5VXD3 122 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 HIST3H2BBQ8N257 126 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 C16orf74Q96GX8 76 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 C12orf57Q99622 126 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 RNASE7Q9H1E1 156 aaKnown RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 RPH3ALQ9UNE2 315 aa6.76□□□□□ -1.33
TPM1-225ENST00000560679 TIMM8BQ9Y5J9 83 aaPredicted RBP6.76□□□□□ -1.33
TPM1-225ENST00000560679 TRAV8-2A0A0B4J237 113 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 IFITM10A6NMD0 228 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 EREGO14944 169 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 LTAP01374 205 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 S100A2P29034 98 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 PDE6HQ13956 83 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 COX19Q49B96 90 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 IGFL4Q6B9Z1 124 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 Q86TA4 180 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 OR8I2Q8N0Y5 310 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 RNF182Q8N6D2 247 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 NHLRC2Q8NBF2 726 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 OR10J6PQ8NGY7 276 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 CMTM2Q8TAZ6 248 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 GPR82Q96P67 336 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 ZNF492Q9P255 531 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 TRAPPC1Q9Y5R8 145 aa6.75□□□□□ -1.33
TPM1-225ENST00000560679 A0A096LPF7 62 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 SMIM27A0A1W2PRY6 76 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 XKRY2A2RUG3 117 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 H3BNG1 76 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 DUSP14O95147 198 aaKnown RBP6.74□□□□□ -1.33
TPM1-225ENST00000560679 HTN1P15515 57 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 RPL7P18124 248 aaKnown RBP6.74□□□□□ -1.33
TPM1-225ENST00000560679 GCSHP23434 173 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 WDR73Q6P4I2 378 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 TMEM183AQ8IXX5 376 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 TMEM256Q8N2U0 113 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 TMEM263Q8WUH6 116 aaKnown RBP6.74□□□□□ -1.33
TPM1-225ENST00000560679 LINC01587Q99440 93 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 MLST8Q9BVC4 326 aa6.74□□□□□ -1.33
TPM1-225ENST00000560679 RNF213Q63HN8 5207 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 91.5 ms