RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PRSS29PA6NIE9 313 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 DSCR8Q96T75 97 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 RAI1Q7Z5J4 1906 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-208ENST00000560371 HLA-DMBP28068 263 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 NPBQ8NG41 125 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 WIPF2Q8TF74 440 aaPredicted RBP10.56□□□□□ -0.72
TRAF3-208ENST00000560371 LENEPQ9Y5L5 61 aa10.56□□□□□ -0.72
TRAF3-208ENST00000560371 CCL18P55774 89 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 AJUBAQ96IF1 538 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 C17orf77Q96MU5 243 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 SEM1Q6ZVN7 128 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 DYNAPQ8N1N2 210 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 C5orf56Q8N8D9 126 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 C18orf32Q8TCD1 76 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 SCRT2Q9NQ03 307 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 GNRH2O43555 120 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 BAALCQ8WXS3 180 aa10.55□□□□□ -0.72
TRAF3-208ENST00000560371 FAM231DQ6ZW35 169 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 XCL1P47992 114 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 TIMM17AQ99595 171 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 C1orf43Q9BWL3 253 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 FBXL19-AS1Q494R0 122 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 PKD1L2Q7Z442 2459 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 HERVK_113P63121 156 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 CITED1Q99966 193 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 Q0VG73 95 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 GTSF1LQ9H1H1 148 aa10.54□□□□□ -0.72
TRAF3-208ENST00000560371 C9JAW5 83 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 Q8N9W7 124 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 Q8NA96 180 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 KIR3DS1Q14943 382 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 MPV17L2Q567V2 206 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 RNF138Q8WVD3 245 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 IGHV4-4A0A075B6R2 117 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 SOCS3O14543 225 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 RNF152Q8N8N0 203 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 SPRY4Q9C004 299 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 CEP295Q9C0D2 2601 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 LOC105371267A0A1B0GV96 52 aa10.53□□□□□ -0.72
TRAF3-208ENST00000560371 SMIM27A0A1W2PRY6 76 aa10.52□□□□□ -0.72
TRAF3-208ENST00000560371 MRPL52Q86TS9 123 aaKnown RBP10.52□□□□□ -0.72
TRAF3-208ENST00000560371 AGPAT4-IT1Q9H0P7 198 aa10.52□□□□□ -0.72
TRAF3-208ENST00000560371 RBAKDNA6NC62 111 aa10.52□□□□□ -0.73
TRAF3-208ENST00000560371 V9GYV3 84 aa10.52□□□□□ -0.73
TRAF3-208ENST00000560371 ZNF726P1Q15940 193 aa10.52□□□□□ -0.73
TRAF3-208ENST00000560371 MRPL23Q16540 153 aaKnown RBP10.52□□□□□ -0.73
TRAF3-208ENST00000560371 RNASE13Q5GAN3 156 aaKnown RBP10.52□□□□□ -0.73
TRAF3-208ENST00000560371 C16orf74Q96GX8 76 aa10.52□□□□□ -0.73
TRAF3-208ENST00000560371 NDUFA12Q9UI09 145 aa10.52□□□□□ -0.73
TRAF3-208ENST00000560371 Q6ZQT7 251 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 C20orf78Q9BR46 151 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 EGR2P11161 476 aaPredicted RBP10.51□□□□□ -0.73
TRAF3-208ENST00000560371 C4orf48Q5BLP8 95 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 C9JQL5 133 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 RPL18AQ02543 176 aaKnown RBP10.51□□□□□ -0.73
TRAF3-208ENST00000560371 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 F8VRH5 84 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 POLQO75417 2590 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 INAFM2P0DMQ5 153 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRORYQ9H606 182 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 IGLV11-55A0A075B6I3 123 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 IGHV4OR15-8A0A075B7B6 117 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 A0A087WW49 117 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 GYPEP15421 78 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRR20EP86478 221 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRR20CP86479 221 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRR20DP86480 221 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRR20BP86481 221 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 PRR20AP86496 221 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 ZNF493Q6ZR52 646 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 RITA1Q96K30 269 aa10.51□□□□□ -0.73
TRAF3-208ENST00000560371 BUB3O43684 328 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 AGRNO00468 2067 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 K7EIM0 57 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 ZFP36P26651 326 aaKnown RBP10.5□□□□□ -0.73
TRAF3-208ENST00000560371 LRP4O75096 1905 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 C9orf153Q5TBE3 101 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 IGHV4-28A0A0C4DH34 117 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 PKIGQ9Y2B9 76 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 C2orf70A6NJV1 201 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 SH2D6Q7Z4S9 175 aa10.5□□□□□ -0.73
TRAF3-208ENST00000560371 FGF23Q9GZV9 251 aaPredicted RBP10.5□□□□□ -0.73
TRAF3-208ENST00000560371 ADCYAP1P18509 176 aa10.49□□□□□ -0.73
TRAF3-208ENST00000560371 ATG2AQ2TAZ0 1938 aa10.49□□□□□ -0.73
TRAF3-208ENST00000560371 CRLF1O75462 422 aa10.49□□□□□ -0.73
TRAF3-208ENST00000560371 ICOSQ9Y6W8 199 aa10.49□□□□□ -0.73
TRAF3-208ENST00000560371 ASPHD1Q5U4P2 390 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 ADAMTSL5Q6ZMM2 481 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 SMAD5-AS1Q9Y6J3 95 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 ATP5G1P05496 136 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 TINCRA0A1B0GVN0 87 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 SPINK8P0C7L1 97 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 CFHR4Q92496 578 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 UBL5Q9BZL1 73 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 MRPL35Q9NZE8 188 aaKnown RBP10.48□□□□□ -0.73
TRAF3-208ENST00000560371 I3L2K1 104 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 IGHG4P01861 327 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 KRTAP27-1Q3LI81 207 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 MORN5Q5VZ52 161 aa10.48□□□□□ -0.73
TRAF3-208ENST00000560371 RS1O15537 224 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms