RNA–Protein interactions for RNA: ENST00000560202.1

USP3-218, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5

Gene USP3, Length 1,681 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-218ENST00000560202 IGKV3-20P01619 116 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 P01737 135 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 CD7P09564 240 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 ZFAND2AQ8N6M9 145 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 ODF3Q96PU9 254 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 FAM110AQ9BQ89 295 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 NAT8BQ9UHF3 227 aa8.31□□□□□ -1.08
USP3-218ENST00000560202 FABP5P3A8MUU1 101 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 HSBP1L1C9JCN9 74 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 J3KRW8 73 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 MDFIQ99750 246 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 RPP21Q9H633 154 aaKnown RBP8.3□□□□□ -1.08
USP3-218ENST00000560202 ST20Q9HBF5 79 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 COL6A5A8TX70 2615 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 A8MTW9 85 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 WIPF1O43516 503 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 CA1P00915 261 aaPredicted RBP8.3□□□□□ -1.08
USP3-218ENST00000560202 C3orf79P0CE67 100 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 LEPP41159 167 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 PRR9Q5T870 116 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 AMTNQ6UX39 209 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 TMEM136Q6ZRR5 245 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 C19orf73Q9NVV2 129 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 STAB1Q9NY15 2570 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 TRRAPQ9Y4A5 3859 aa8.3□□□□□ -1.08
USP3-218ENST00000560202 KLLNB2CW77 178 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 KIR3DS1Q14943 382 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 OCIAD2Q56VL3 154 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 CT83Q5H943 113 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 NIT1Q86X76 327 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 VPS25Q9BRG1 176 aa8.29□□□□□ -1.08
USP3-218ENST00000560202 RBMY1BA6NDE4 496 aaKnown RBP8.28□□□□□ -1.08
USP3-218ENST00000560202 RBMY1EA6NEQ0 496 aaKnown RBP8.28□□□□□ -1.08
USP3-218ENST00000560202 RBMY1DP0C7P1 496 aaKnown RBP8.28□□□□□ -1.08
USP3-218ENST00000560202 RNASE4P34096 147 aaKnown RBP8.28□□□□□ -1.08
USP3-218ENST00000560202 VAMP3Q15836 100 aa8.28□□□□□ -1.08
USP3-218ENST00000560202 STHQ8IWL8 128 aa8.28□□□□□ -1.08
USP3-218ENST00000560202 CLUHP3Q96NS8 147 aa8.28□□□□□ -1.08
USP3-218ENST00000560202 CSTL1Q9H114 145 aa8.28□□□□□ -1.08
USP3-218ENST00000560202 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
USP3-218ENST00000560202 TRAV21A0A0B4J279 112 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 SMIM27A0A1W2PRY6 76 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 TMEM189A5PLL7 270 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 A8MWL6 223 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 M0R2Z0 102 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 APCSP02743 223 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 SPINK13Q1W4C9 94 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 PRR31Q5SQ13 230 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 Q6AWC8 147 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 Q6ZQT7 251 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 GTSCR1Q86UQ5 136 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 TSKUQ8WUA8 353 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 WFDC10AQ9H1F0 79 aa8.27□□□□□ -1.08
USP3-218ENST00000560202 TRAV12-2A0A075B6T6 113 aa8.27□□□□□ -1.09
USP3-218ENST00000560202 CRXO43186 299 aaPredicted RBP8.27□□□□□ -1.09
USP3-218ENST00000560202 ORM1P02763 201 aa8.27□□□□□ -1.09
USP3-218ENST00000560202 PMCHP20382 165 aa8.27□□□□□ -1.09
USP3-218ENST00000560202 HINT1P49773 126 aaPredicted RBP8.27□□□□□ -1.09
USP3-218ENST00000560202 TRPT1Q86TN4 253 aaKnown RBP8.27□□□□□ -1.09
USP3-218ENST00000560202 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
USP3-218ENST00000560202 C11orf21Q9P2W6 132 aa8.27□□□□□ -1.09
USP3-218ENST00000560202 ANK2Q01484 3957 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 TMSB15BA0A087X1C1 80 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 C7orf71A4D174 169 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 TCL1AP56279 114 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 FXYD7P58549 80 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 LINC01559Q495D7 138 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 OXLD1Q5BKU9 147 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 MRPL54Q6P161 138 aaKnown RBP8.26□□□□□ -1.09
USP3-218ENST00000560202 DEFB125Q8N687 156 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 GFRA4Q9GZZ7 299 aa8.26□□□□□ -1.09
USP3-218ENST00000560202 SORL1Q92673 2214 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 TRAV12-3A0A0B4J271 114 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 IGKV3D-20A0A0C4DH25 116 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 FAM231BA6NCW3 169 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 HSBP1O75506 76 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 SRIP30626 198 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 RNF151Q2KHN1 245 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 ATP5L2Q7Z4Y8 100 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 GTSF1Q8WW33 167 aa8.25□□□□□ -1.09
USP3-218ENST00000560202 HIGD1CA8MV81 97 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 OR5AL1P0C617 328 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 ZNF575Q86XF7 245 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 NUP35Q8NFH5 326 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 SVIPQ8NHG7 77 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 CBY3A6NI87 242 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 F2Z2F3 143 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 FOXA3P55318 350 aaPredicted RBP8.24□□□□□ -1.09
USP3-218ENST00000560202 MUC21Q5SSG8 566 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 C18orf32Q8TCD1 76 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 CHCHD1Q96BP2 118 aaKnown RBP8.24□□□□□ -1.09
USP3-218ENST00000560202 TMEM70Q9BUB7 260 aa8.24□□□□□ -1.09
USP3-218ENST00000560202 CMYA5Q8N3K9 4069 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 ANXA2RQ3ZCQ2 193 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 SLC25A34Q6PIV7 304 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 Q8N1Y9 231 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 PGLYRP4Q96LB8 373 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 RCHY1Q96PM5 261 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 TMEM191AQ9H0A3 160 aa8.23□□□□□ -1.09
USP3-218ENST00000560202 AGRNO00468 2067 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 442.8 ms