RNA–Protein interactions for RNA: ENST00000560107.6

LRRC49-221, Transcript of leucine rich repeat containing 49, humanhuman

TSL 5

Gene LRRC49, Length 2,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC49-221ENST00000560107 SFTA2Q6UW10 78 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 VMO1Q7Z5L0 202 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 SCGB3A1Q96QR1 104 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 C20orf78Q9BR46 151 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 SMIM2Q9BVW6 85 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 CACNA1BQ00975 2339 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 TRAV12-1A0A0B4J245 112 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 IGF1P05019 195 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 GRNP28799 593 aaKnown RBP3.92□□□□□ -1.78
LRRC49-221ENST00000560107 PRR9Q5T870 116 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 CLEC19AQ6UXS0 136 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 NEXN-AS1Q8NBZ9 246 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 RPL39LQ96EH5 51 aaKnown RBP3.92□□□□□ -1.78
LRRC49-221ENST00000560107 SLC50A1Q9BRV3 221 aa3.92□□□□□ -1.78
LRRC49-221ENST00000560107 IGHV4-4A0A075B6R2 117 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 LINC01549A6NIU2 74 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 LINC01619G3V211 115 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 M0R1W7 72 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 M0R381 172 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 APOMO95445 188 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 NBL1P41271 181 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 SMCPP49901 116 aaPredicted RBP3.91□□□□□ -1.78
LRRC49-221ENST00000560107 C8orf86Q6ZUL3 223 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 Q8N9W7 124 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 OR13C6PQ8NH95 151 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 RASL10AQ92737 203 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 TOMM6Q96B49 74 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 PLEKHB2Q96CS7 222 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 DUX3Q96PT4 197 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 RAXQ9Y2V3 346 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 HRNRQ86YZ3 2850 aaPredicted RBP3.91□□□□□ -1.78
LRRC49-221ENST00000560107 LINC01548A6NM66 108 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 SUMO2P61956 95 aaKnown RBP3.91□□□□□ -1.78
LRRC49-221ENST00000560107 FAM19A5Q7Z5A7 132 aaPredicted RBP3.91□□□□□ -1.78
LRRC49-221ENST00000560107 CCDC140Q96MF4 163 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 VKORC1Q9BQB6 163 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 PRADC1Q9BSG0 188 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 BEX4Q9NWD9 120 aaPredicted RBP3.91□□□□□ -1.78
LRRC49-221ENST00000560107 ZNF292O60281 2723 aa3.91□□□□□ -1.78
LRRC49-221ENST00000560107 LOC107984156A0A0G2JMH3 177 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 PRSS29PA6NIE9 313 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ZNF815PA8K554 130 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 G3V318 75 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ATP6V0E1O15342 81 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 SLC25A16P16260 332 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 PSMB2P49721 201 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ZNF415Q09FC8 603 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 FOXI1Q12951 378 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 EBI3Q14213 229 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ORMDL2Q53FV1 153 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 CFAP126Q5VTH2 177 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ZFP2Q6ZN57 461 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 C9orf47Q6ZRZ4 202 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 NFE4Q86UQ8 179 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ARL17AQ8IVW1 177 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 C14orf178Q8N769 122 aaPredicted RBP3.9□□□□□ -1.78
LRRC49-221ENST00000560107 SYT8Q8NBV8 401 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 KLHL30-AS1Q8NEE0 82 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 DEFB104AQ8WTQ1 72 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 MED13LQ71F56 2210 aa3.9□□□□□ -1.78
LRRC49-221ENST00000560107 ANKHD1Q8IWZ3 2542 aaKnown RBP3.9□□□□□ -1.79
LRRC49-221ENST00000560107 TTC28Q96AY4 2481 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 RNF223E7ERA6 249 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 DEFB1P60022 68 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 C2orf66Q6UXQ4 117 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 SCGB1D4Q6XE38 83 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 TIMD4Q96H15 378 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 C16orf92Q96LL3 132 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 C20orf173Q96LM9 149 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 SPANXA1Q9NS26 97 aa3.9□□□□□ -1.79
LRRC49-221ENST00000560107 MGPP08493 103 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 SPINK8P0C7L1 97 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 ZFP36P26651 326 aaKnown RBP3.89□□□□□ -1.79
LRRC49-221ENST00000560107 EMP1P54849 157 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 SRSF9Q13242 221 aaKnown RBP eCLIP3.89□□□□□ -1.79
LRRC49-221ENST00000560107 DLX4Q92988 240 aaPredicted RBP3.89□□□□□ -1.79
LRRC49-221ENST00000560107 METTL26Q96S19 204 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 TMEM126AQ9H061 195 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 CDIP1Q9H305 208 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 CCDC179H3BU77 68 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 COX6B1P14854 86 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 S100A4P26447 101 aaKnown RBP3.89□□□□□ -1.79
LRRC49-221ENST00000560107 UBE2D1P51668 147 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 FHL3Q13643 280 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 MRPL53Q96EL3 112 aaKnown RBP3.89□□□□□ -1.79
LRRC49-221ENST00000560107 LINC00477Q96M19 166 aa3.89□□□□□ -1.79
LRRC49-221ENST00000560107 LOC107984640A0A0U1RRK4 108 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 OOSP1A8MZH6 123 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 GNRH2O43555 120 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 DUSP14O95147 198 aaKnown RBP3.88□□□□□ -1.79
LRRC49-221ENST00000560107 MT-ATP8P03928 68 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 CRYGDP07320 174 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 RPL35AP18077 110 aaKnown RBP3.88□□□□□ -1.79
LRRC49-221ENST00000560107 C4orf26Q17RF5 130 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 ANXA2RQ3ZCQ2 193 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 MINOS1Q5TGZ0 78 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 STHQ8IWL8 128 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 ZFAND2AQ8N6M9 145 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 EEF1AKMT3Q96AZ1 226 aa3.88□□□□□ -1.79
LRRC49-221ENST00000560107 CARD19Q96LW7 228 aa3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms