RNA–Protein interactions for RNA: ENST00000559754.1

SPG11-218, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5

Gene SPG11, Length 411 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-218ENST00000559754 TNFP01375 233 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 POLR2JP52435 117 aaKnown RBP1.53□□□□□ -2.16
SPG11-218ENST00000559754 SPANXN1Q5VSR9 72 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 PKD1L2Q7Z442 2459 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 C15orf53Q8NAA6 179 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 CCNB3Q8WWL7 1395 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 ZNF625Q96I27 306 aaPredicted RBP1.53□□□□□ -2.16
SPG11-218ENST00000559754 PPP3R2Q96LZ3 170 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 SEC11CQ9BY50 192 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 CYSTM1Q9H1C7 97 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 CASP8AP2Q9UKL3 1982 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 SNURFQ9Y675 71 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 SERP1Q9Y6X1 66 aa1.53□□□□□ -2.16
SPG11-218ENST00000559754 BAHCC1Q9P281 2608 aa1.53□□□□□ -2.17
SPG11-218ENST00000559754 UNC13CQ8NB66 2214 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 ZNF142P52746 1687 aaPredicted RBP1.52□□□□□ -2.17
SPG11-218ENST00000559754 MAPKBP1O60336 1514 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 IGLV3-32A0A0A0MS00 114 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 TMEM30CPA0ZSE6 113 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 JMJD7-PLA2G4BH0Y9G9 81 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 CCL25O15444 150 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 HCRTO43612 131 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 SNAPC5O75971 98 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 IL5P05113 134 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 RBP2P50120 134 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 TPPP2P59282 170 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 PPP3R1P63098 170 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 KRTAP6-3Q3LI67 103 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 Q56UQ5 140 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 PCOTHQ58A44 107 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 Q6AWC8 147 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 PLPP5Q8NEB5 264 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 SPTSSAQ969W0 71 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 TMEM242Q9NWH2 141 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 TMEM14CQ9P0S9 112 aa1.52□□□□□ -2.17
SPG11-218ENST00000559754 INTS1Q8N201 2190 aaKnown RBP1.52□□□□□ -2.17
SPG11-218ENST00000559754 NRKQ7Z2Y5 1582 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 PZPP20742 1482 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 DAPK1P53355 1430 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 VPS8Q8N3P4 1428 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 KTN1Q86UP2 1357 aaKnown RBP1.51□□□□□ -2.17
SPG11-218ENST00000559754 MCRIP1C9JLW8 97 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 NDUFB6O95139 128 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 PPYP01298 95 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 IGHV3-30P01768 117 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 PIRTP0C851 137 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 IGHV3-30-5P0DP03 117 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 PIPP12273 146 aaPredicted RBP1.51□□□□□ -2.17
SPG11-218ENST00000559754 UNQ5815/PRO19632Q6UWF5 114 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 UNQ6190/PRO20217Q6UXQ8 127 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 LINC00322Q6ZN03 302 aaPredicted RBP1.51□□□□□ -2.17
SPG11-218ENST00000559754 ZNF563Q8TA94 476 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 IER3IP1Q9Y5U9 82 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 MUC22E2RYF6 1773 aaPredicted RBP1.51□□□□□ -2.17
SPG11-218ENST00000559754 CTTNBP2Q8WZ74 1663 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 USP24Q9UPU5 2620 aa1.51□□□□□ -2.17
SPG11-218ENST00000559754 PTPRMP28827 1452 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 TRAV17A0A0B4J275 112 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 NUPR2A6NF83 97 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 APOC4-APOC2K7ER74 178 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 APOC2P02655 101 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 GYPBP06028 91 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 PDE6GP18545 87 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 C12orf73Q69YU5 71 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 CSAG1Q6PB30 78 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 LYPD5Q6UWN5 251 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 NDUFA11Q86Y39 141 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 DMAC1Q96GE9 116 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 RPRMQ9NS64 109 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 COA4Q9NYJ1 87 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 NDUFA12Q9UI09 145 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 C22orf24Q9Y442 160 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 ZFYVE16Q7Z3T8 1539 aa1.5□□□□□ -2.17
SPG11-218ENST00000559754 COL4A1P02462 1669 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 TRBV10-1A0A0K0K1A3 114 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 CXorf51AA0A1B0GTR3 108 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 KLF7O75840 302 aaPredicted RBP1.49□□□□□ -2.17
SPG11-218ENST00000559754 DNAL4O96015 105 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 IGLV3-1P01715 115 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 SLC25A6P12236 298 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 IL7P13232 177 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 MRPL54Q6P161 138 aaKnown RBP1.49□□□□□ -2.17
SPG11-218ENST00000559754 Q6ZS92 163 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 LSM10Q969L4 123 aaKnown RBP1.49□□□□□ -2.17
SPG11-218ENST00000559754 TMEM141Q96I45 108 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 LIMD2Q9BT23 127 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 PCNX2A6NKB5 2137 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 DLEC1Q9Y238 1755 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 OTOGLQ3ZCN5 2332 aa1.49□□□□□ -2.17
SPG11-218ENST00000559754 PHRF1Q9P1Y6 1649 aaKnown RBP1.48□□□□□ -2.17
SPG11-218ENST00000559754 IGKV3D-7A0A0C4DH55 119 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 IGKV3OR2-268A0A0C4DH90 116 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 SNCGO76070 127 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 IGKCP01834 107 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 S100A8P05109 93 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 SPRNQ5BIV9 151 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 GDF5OSQ5U4N7 250 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 SLC48A1Q6P1K1 146 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 ODF3Q96PU9 254 aa1.48□□□□□ -2.17
SPG11-218ENST00000559754 ATG5Q9H1Y0 275 aa1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms