RNA–Protein interactions for RNA: ENST00000559556.5

TPM1-220, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene TPM1, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-220ENST00000559556 IGHV3-30-3P0DP02 117 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 IGHV3-30-5P0DP03 117 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 GNG5P63218 68 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 ZNF345Q14585 488 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 ACOT6Q3I5F7 207 aaPredicted RBP8.7□□□□□ -1.02
TPM1-220ENST00000559556 NDFIP1Q9BT67 221 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 GTSF1LQ9H1H1 148 aa8.7□□□□□ -1.02
TPM1-220ENST00000559556 A0A1W2PPV4 95 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 ARL14EPLP0DKL9 152 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 MGST1P10620 155 aaKnown RBP8.69□□□□□ -1.02
TPM1-220ENST00000559556 ZNF80P51504 273 aaPredicted RBP8.69□□□□□ -1.02
TPM1-220ENST00000559556 RAB2AP61019 212 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 ZNF506Q5JVG8 444 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 OR11H4Q8NGC9 324 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 PTH2Q96A98 100 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 TM2D2Q9BX73 214 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 WFDC1Q9HC57 220 aa8.69□□□□□ -1.02
TPM1-220ENST00000559556 KANTRA0A1W2PQU2 76 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 LINC00694P0DN24 101 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 WFDC2Q14508 124 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 KCNRGQ8N5I3 272 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 C5orf17Q8NAS9 161 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 ATP6V0E2Q8NHE4 81 aa8.68□□□□□ -1.02
TPM1-220ENST00000559556 IGHV3-73A0A0B4J1V6 119 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 PGPEP1LA6NFU8 196 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 J3QL48 77 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 HMGB3O15347 200 aaKnown RBP8.67□□□□□ -1.02
TPM1-220ENST00000559556 GCGP01275 180 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 PLA2G1BP04054 148 aaKnown RBP8.67□□□□□ -1.02
TPM1-220ENST00000559556 TCRAP04437 139 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 RNASE3P12724 160 aaKnown RBP8.67□□□□□ -1.02
TPM1-220ENST00000559556 EIF5AP63241 154 aaKnown RBP8.67□□□□□ -1.02
TPM1-220ENST00000559556 Q8N3U1 123 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 TMEM75Q8N9X5 138 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 SUN5Q8TC36 379 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 SGK494Q96LW2 274 aa8.67□□□□□ -1.02
TPM1-220ENST00000559556 TRAV8-3A0A0A6YYJ7 113 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 RNF222A6NCQ9 220 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 K7EQM0 130 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 IGLV2-11P01706 119 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 STAG3L2P0CL84 134 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 STAG3L3P0CL85 134 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 CDC34P49427 236 aaPredicted RBP8.66□□□□□ -1.02
TPM1-220ENST00000559556 LGALSLQ3ZCW2 172 aaPredicted RBP8.66□□□□□ -1.02
TPM1-220ENST00000559556 PIK3CD-AS1Q5SR53 167 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 ZFP2Q6ZN57 461 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 TMUB2Q71RG4 321 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 LINC00528Q8N1L1 170 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 OR10G9Q8NGN4 311 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 OR10G7Q8NGN6 311 aa8.66□□□□□ -1.02
TPM1-220ENST00000559556 BORCS7-ASMTA0A0B4J1R7 106 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 KRTAP29-1A8MX34 341 aaPredicted RBP8.65□□□□□ -1.02
TPM1-220ENST00000559556 SMUG1Q53HV7 270 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 C9orf62Q8N4C0 152 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 OR2G3Q8NGZ4 309 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 SH3BGRL3Q9H299 93 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 PARLQ9H300 379 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 PSG8Q9UQ74 426 aa8.65□□□□□ -1.02
TPM1-220ENST00000559556 GGTLC3B5MD39 225 aa8.64□□□□□ -1.03
TPM1-220ENST00000559556 BCL2L11O43521 198 aa8.64□□□□□ -1.03
TPM1-220ENST00000559556 GCHFRP30047 84 aa8.64□□□□□ -1.03
TPM1-220ENST00000559556 FLI1Q01543 452 aaPredicted RBP8.64□□□□□ -1.03
TPM1-220ENST00000559556 CYB561D1Q8N8Q1 229 aa8.64□□□□□ -1.03
TPM1-220ENST00000559556 A8MWV9 139 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 LECT2O14960 151 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 NKX2-5P52952 324 aaPredicted RBP8.63□□□□□ -1.03
TPM1-220ENST00000559556 TOR2AQ5JU69 321 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
TPM1-220ENST00000559556 SLC51BQ86UW2 128 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 RAB24Q969Q5 203 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 LINC00479Q96M42 142 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 PSMG3Q9BT73 122 aaPredicted RBP8.63□□□□□ -1.03
TPM1-220ENST00000559556 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
TPM1-220ENST00000559556 EPDR1Q9UM22 224 aa8.63□□□□□ -1.03
TPM1-220ENST00000559556 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.62□□□□□ -1.03
TPM1-220ENST00000559556 A0A087WWC5 75 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 SUMO1P63165 101 aaKnown RBP8.62□□□□□ -1.03
TPM1-220ENST00000559556 EIF5AL1Q6IS14 154 aaKnown RBP8.62□□□□□ -1.03
TPM1-220ENST00000559556 UFSP1Q6NVU6 142 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 PRNTQ86SH4 94 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 DEFB104AQ8WTQ1 72 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 ZNF471Q9BX82 626 aaPredicted RBP8.62□□□□□ -1.03
TPM1-220ENST00000559556 TMEM167BQ9NRX6 74 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 COX11Q9Y6N1 276 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 HMCN2Q8NDA2 5059 aa8.62□□□□□ -1.03
TPM1-220ENST00000559556 IGKV3D-20A0A0C4DH25 116 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 GAGE12JA6NER3 117 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 TPT1P13693 172 aaKnown RBP8.61□□□□□ -1.03
TPM1-220ENST00000559556 GAGE1Q13065 139 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 GAGE4Q13068 117 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 GAGE5Q13069 117 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 GAGE13Q4V321 117 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 SAPCD1Q5SSQ6 148 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 SCXQ7RTU7 201 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 HSD17B11Q8NBQ5 300 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 IL36BQ9NZH7 164 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 Q9UF83 564 aa8.61□□□□□ -1.03
TPM1-220ENST00000559556 CXorf1O96002 111 aa8.6□□□□□ -1.03
TPM1-220ENST00000559556 S100A4P26447 101 aaKnown RBP8.6□□□□□ -1.03
TPM1-220ENST00000559556 ATP6V0CP27449 155 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms