RNA–Protein interactions for RNA: ENST00000558989.1

SPG11-214, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 1,816 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-214ENST00000558989 FAM74A1Q5RGS3 127 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 Q6ZNX1 250 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 LYPD1Q8N2G4 141 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 ZFAND2AQ8N6M9 145 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 GNPNAT1Q96EK6 184 aaPredicted RBP6.82□□□□□ -1.32
SPG11-214ENST00000558989 C20orf144Q9BQM9 153 aa6.82□□□□□ -1.32
SPG11-214ENST00000558989 KLLNB2CW77 178 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 F6UZH7 168 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 SERF2P84101 59 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 TAL2Q16559 108 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 NDUFA5Q16718 116 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 PAPPA-AS1Q5QFB9 102 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 AKR1C8PQ5T2L2 129 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 RXFP4Q8TDU9 374 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 FAM19A4Q96LR4 140 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 PYGO2Q9BRQ0 406 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 CYTL1Q9NRR1 136 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 MUC4Q99102 2169 aa6.81□□□□□ -1.32
SPG11-214ENST00000558989 EPPK1P58107 5090 aaKnown RBP6.81□□□□□ -1.32
SPG11-214ENST00000558989 A0A1B0GV50 99 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 ZNF324O75467 553 aaPredicted RBP6.8□□□□□ -1.32
SPG11-214ENST00000558989 OR5I1Q13606 314 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 ZNF726P1Q15940 193 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 ZNF493Q6ZR52 646 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 Q6ZTI0 123 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 UBE2DNLQ8IWF7 75 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 NUDT3O95989 172 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 CXorf1O96002 111 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 ATP5G1P05496 136 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 CRISP2P16562 243 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 ATP5G3P48201 142 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 TCTAP57738 103 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 EIF4E3Q8N5X7 224 aaKnown RBP6.8□□□□□ -1.32
SPG11-214ENST00000558989 ZNF471Q9BX82 626 aaPredicted RBP6.8□□□□□ -1.32
SPG11-214ENST00000558989 KLF12Q9Y4X4 402 aa6.8□□□□□ -1.32
SPG11-214ENST00000558989 IGHV1OR15-1A0A075B7D0 117 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 TRGV1A0A0A0MS02 117 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 A0A0J9YY99 117 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 RBAKDNA6NC62 111 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 FAM231BA6NCW3 169 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 M0R2N4 97 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 TAAR5O14804 337 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 MRPL52Q86TS9 123 aaKnown RBP6.79□□□□□ -1.32
SPG11-214ENST00000558989 ST6GAL2Q96JF0 529 aa6.79□□□□□ -1.32
SPG11-214ENST00000558989 VPS13DQ5THJ4 4388 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 CTXND1A0A1B0GTU2 59 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 KANTRA0A1W2PQU2 76 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 PFDN1O60925 122 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 IGHV3-53P01767 116 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 KCNRGQ8N5I3 272 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 C8orf49Q96NF6 230 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TMEM167BQ9NRX6 74 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 MRPL16Q9NX20 251 aaKnown RBP6.78□□□□□ -1.32
SPG11-214ENST00000558989 IGLV2-18A0A075B6J9 118 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 MAP1LC3B2A6NCE7 125 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 GGTLC3B5MD39 225 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 IFNA7P01567 189 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 RIGQ13278 110 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TMEM183BQ1AE95 376 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 PRNTQ86SH4 94 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TMEM183AQ8IXX5 376 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 C11orf72Q8NBR9 251 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TVP23CQ96ET8 276 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 MAP1LC3BQ9GZQ8 125 aa6.78□□□□□ -1.32
SPG11-214ENST00000558989 TCRAP04437 139 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 P0DMU3 169 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 FAM231AP0DMU4 169 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 FAM231CP0DMU5 169 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 PIK3CD-AS1Q5SR53 167 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 TMUB2Q71RG4 321 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 C5orf17Q8NAS9 161 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 FAM213BQ8TBF2 198 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 LINC00479Q96M42 142 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 SPANXB1Q9NS25 103 aaPredicted RBP6.77□□□□□ -1.33
SPG11-214ENST00000558989 MDFICQ9P1T7 246 aa6.77□□□□□ -1.33
SPG11-214ENST00000558989 A0A0D9SG52 128 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 BCL2L11O43521 198 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 GNRH2O43555 120 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 HOXA5P20719 270 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 ZNF345Q14585 488 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 LAGE3Q14657 143 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 EPDR1Q9UM22 224 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 PSG8Q9UQ74 426 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 HMSDA8MTL9 139 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 NMBP08949 121 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 TCL1AP56279 114 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 POM121L12Q8N7R1 296 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 MAPKAPK5-AS1Q8N8E1 139 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 TMED6Q8WW62 240 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 NDFIP1Q9BT67 221 aa6.76□□□□□ -1.33
SPG11-214ENST00000558989 LOC100996750A0A140TA64 210 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 GCGP01275 180 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 ZNF80P51504 273 aaPredicted RBP6.75□□□□□ -1.33
SPG11-214ENST00000558989 FLI1Q01543 452 aaPredicted RBP6.75□□□□□ -1.33
SPG11-214ENST00000558989 DAZ2Q13117 558 aaKnown RBP6.75□□□□□ -1.33
SPG11-214ENST00000558989 Q6AWC8 147 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 CYB561D1Q8N8Q1 229 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 TMEM75Q8N9X5 138 aa6.75□□□□□ -1.33
SPG11-214ENST00000558989 FAM210BQ96KR6 192 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms