RNA–Protein interactions for RNA: ENST00000558855.5

VPS18-203, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS18, Length 1,050 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-203ENST00000558855 PTTG1O95997 202 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 CXorf1O96002 111 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 SMR3BP02814 79 aaPredicted RBP9.04□□□□□ -0.96
VPS18-203ENST00000558855 CRIP1P50238 77 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 UBE2G2P60604 165 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 SMUG1Q53HV7 270 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 Q5VSD8 79 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 Q86TA4 180 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 NDFIP1Q9BT67 221 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 PARLQ9H300 379 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 TNFSF18Q9UNG2 199 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 ARL2-SNX15V9GYD0 113 aa9.04□□□□□ -0.96
VPS18-203ENST00000558855 TRBV6-4A0A1B0GX49 114 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 IBA57-AS1B1ANH7 110 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 TAAR5O14804 337 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 EREGO14944 169 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 GIPP09681 153 aaPredicted RBP9.03□□□□□ -0.96
VPS18-203ENST00000558855 SERF2P84101 59 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 RHOHQ15669 191 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 UFSP1Q6NVU6 142 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 DNAJC30Q96LL9 226 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 ACTR3CQ9C0K3 210 aaPredicted RBP9.03□□□□□ -0.96
VPS18-203ENST00000558855 TMEM167BQ9NRX6 74 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 FAM30AQ9NZY2 134 aa9.03□□□□□ -0.96
VPS18-203ENST00000558855 FXYD6-FXYD2A0A087WZ82 144 aa9.02□□□□□ -0.97
VPS18-203ENST00000558855 OR10J3Q5JRS4 329 aa9.02□□□□□ -0.97
VPS18-203ENST00000558855 C14orf178Q8N769 122 aaPredicted RBP9.02□□□□□ -0.97
VPS18-203ENST00000558855 PTH2Q96A98 100 aa9.02□□□□□ -0.97
VPS18-203ENST00000558855 ZC2HC1AQ96GY0 325 aa9.02□□□□□ -0.97
VPS18-203ENST00000558855 SRRM2Q9UQ35 2752 aaKnown RBP9.02□□□□□ -0.97
VPS18-203ENST00000558855 PKHD1L1Q86WI1 4243 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 A0A1W2PRE2 83 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GAGE12JA6NER3 117 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 K7EP13 123 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 PEX7O00628 323 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GCSHP23434 173 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GAGE1Q13065 139 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GAGE4Q13068 117 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GAGE5Q13069 117 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 GAGE13Q4V321 117 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 LELP1Q5T871 98 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 C10orf126Q8N4M7 172 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 CYTL1Q9NRR1 136 aa9.01□□□□□ -0.97
VPS18-203ENST00000558855 CTXND1A0A1B0GTU2 59 aa9□□□□□ -0.97
VPS18-203ENST00000558855 GRIFINA4D1Z8 144 aa9□□□□□ -0.97
VPS18-203ENST00000558855 FAM74A7A6NL05 159 aa9□□□□□ -0.97
VPS18-203ENST00000558855 H3BVH4 76 aa9□□□□□ -0.97
VPS18-203ENST00000558855 MBP02144 154 aa9□□□□□ -0.97
VPS18-203ENST00000558855 DMRTA1Q5VZB9 504 aa9□□□□□ -0.97
VPS18-203ENST00000558855 SH2D6Q7Z4S9 175 aa9□□□□□ -0.97
VPS18-203ENST00000558855 Q8N814 137 aa9□□□□□ -0.97
VPS18-203ENST00000558855 OR2T35Q8NGX2 323 aa9□□□□□ -0.97
VPS18-203ENST00000558855 ATP6V0E2Q8NHE4 81 aa9□□□□□ -0.97
VPS18-203ENST00000558855 PRADC1Q9BSG0 188 aa9□□□□□ -0.97
VPS18-203ENST00000558855 GTSF1LQ9H1H1 148 aa9□□□□□ -0.97
VPS18-203ENST00000558855 IGLV5-52A0A0A0MRZ9 124 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 SMLR1H3BR10 107 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 K7EQM0 130 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 M0R036 132 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 INAFM2P0DMQ5 153 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 MGST1P10620 155 aaKnown RBP8.99□□□□□ -0.97
VPS18-203ENST00000558855 FHITP49789 147 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 ZFP69Q49AA0 526 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 DAZ4Q86SG3 579 aaKnown RBP8.99□□□□□ -0.97
VPS18-203ENST00000558855 BATF3Q9NR55 127 aa8.99□□□□□ -0.97
VPS18-203ENST00000558855 DAZ3Q9NR90 486 aaKnown RBP8.99□□□□□ -0.97
VPS18-203ENST00000558855 FLG2Q5D862 2391 aaPredicted RBP8.99□□□□□ -0.97
VPS18-203ENST00000558855 TRAV8-6A0A0B4J262 113 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 KRBOX1C9JBD0 128 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 LECT2O14960 151 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 PSCAO43653 123 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 SH2D1AO60880 128 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 IFNA7P01567 189 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 LGALSLQ3ZCW2 172 aaPredicted RBP8.98□□□□□ -0.97
VPS18-203ENST00000558855 SAPCD1Q5SSQ6 148 aa8.98□□□□□ -0.97
VPS18-203ENST00000558855 FABP5P3A8MUU1 101 aa8.97□□□□□ -0.97
VPS18-203ENST00000558855 B4DEV8 164 aa8.97□□□□□ -0.97
VPS18-203ENST00000558855 ARMS2P0C7Q2 107 aa8.97□□□□□ -0.97
VPS18-203ENST00000558855 ASIPP42127 132 aa8.97□□□□□ -0.97
VPS18-203ENST00000558855 IL36BQ9NZH7 164 aa8.97□□□□□ -0.97
VPS18-203ENST00000558855 A0A087WWL8 130 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 TMSB15BA0A087X1C1 80 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 BORCS7-ASMTA0A0B4J1R7 106 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 MAP1LC3B2A6NCE7 125 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 CIDEAO60543 219 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 S100A4P26447 101 aaKnown RBP8.96□□□□□ -0.98
VPS18-203ENST00000558855 LINC01620Q4KN68 170 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 DNLZQ5SXM8 178 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 ZFP2Q6ZN57 461 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 COX8CQ7Z4L0 72 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 INO80EQ8NBZ0 244 aaPredicted RBP8.96□□□□□ -0.98
VPS18-203ENST00000558855 MAP1LC3BQ9GZQ8 125 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 FAT3Q8TDW7 4589 aa8.96□□□□□ -0.98
VPS18-203ENST00000558855 A8MWV9 139 aa8.95□□□□□ -0.98
VPS18-203ENST00000558855 ARPC5O15511 151 aa8.95□□□□□ -0.98
VPS18-203ENST00000558855 FRZBQ92765 325 aa8.95□□□□□ -0.98
VPS18-203ENST00000558855 RPL19P84098 196 aaKnown RBP8.94□□□□□ -0.98
VPS18-203ENST00000558855 LAGE3Q14657 143 aa8.94□□□□□ -0.98
VPS18-203ENST00000558855 AKR1C8PQ5T2L2 129 aa8.94□□□□□ -0.98
VPS18-203ENST00000558855 FAM74A4Q5TZK3 123 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms