RNA–Protein interactions for RNA: ENST00000558763.1

SMAD3-207, Transcript of SMAD family member 3, humanhuman

TSL 2

Gene SMAD3, Length 1,957 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-207ENST00000558763 GAS8-AS1O95177 125 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 MED14OSP0DP75 135 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 HLA-DRB4P13762 266 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 RAB4AP20338 218 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 PMCHP20382 165 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 LEPP41159 167 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 AMTP48728 403 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 SAMD10Q9BYL1 202 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 HLA-DRB4X5D2U9 266 aa9.56□□□□□ -0.88
SMAD3-207ENST00000558763 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 TRAV12-3A0A0B4J271 114 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 SPRY2O43597 315 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 DUSP14O95147 198 aaKnown RBP9.55□□□□□ -0.88
SMAD3-207ENST00000558763 CDKN1BP46527 198 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 SPINK13Q1W4C9 94 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 TDRG1Q3Y452 100 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 RNASEKQ6P5S7 137 aaKnown RBP9.55□□□□□ -0.88
SMAD3-207ENST00000558763 SPAG8Q99932 426 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-207ENST00000558763 H3BMM0 161 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 CRXO43186 299 aaPredicted RBP9.55□□□□□ -0.88
SMAD3-207ENST00000558763 NXPH4O95158 308 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 EVI2AP22794 236 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 ODF3L2Q3SX64 289 aa9.55□□□□□ -0.88
SMAD3-207ENST00000558763 TRAV25A0A0B4J276 109 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 SMKR1H3BMG3 65 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 SAP30O75446 220 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1A1P0DJD3 496 aaKnown RBP9.54□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1CP0DJD4 496 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 ASIPP42127 132 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 CACNG7P62955 275 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 RBMY1FQ15415 496 aaKnown RBP9.54□□□□□ -0.88
SMAD3-207ENST00000558763 ORMDL3Q8N138 153 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 Q8N976 141 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 NCR2O95944 276 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 CHCHD1Q96BP2 118 aaKnown RBP9.54□□□□□ -0.88
SMAD3-207ENST00000558763 PRELID3AQ96N28 172 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 GSN-AS1Q9NRJ2 163 aa9.54□□□□□ -0.88
SMAD3-207ENST00000558763 OR4C46A6NHA9 309 aa9.53□□□□□ -0.88
SMAD3-207ENST00000558763 HSBP1O75506 76 aa9.53□□□□□ -0.88
SMAD3-207ENST00000558763 NPYP01303 97 aa9.53□□□□□ -0.88
SMAD3-207ENST00000558763 LINC00614P0C842 121 aa9.53□□□□□ -0.88
SMAD3-207ENST00000558763 IGHV1-24A0A0C4DH33 117 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 PCP4L1A6NKN8 68 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 PMCHL1Q16048 86 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 SPANXN1Q5VSR9 72 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 GATA1P15976 413 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-207ENST00000558763 TSPOP30536 169 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 FAM159AQ6UWV7 190 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
SMAD3-207ENST00000558763 CMYA5Q8N3K9 4069 aa9.52□□□□□ -0.89
SMAD3-207ENST00000558763 A0A096LNJ9 63 aa9.51□□□□□ -0.89
SMAD3-207ENST00000558763 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
SMAD3-207ENST00000558763 M0R381 172 aa9.51□□□□□ -0.89
SMAD3-207ENST00000558763 S100A4P26447 101 aaKnown RBP9.51□□□□□ -0.89
SMAD3-207ENST00000558763 CKS2P33552 79 aa9.51□□□□□ -0.89
SMAD3-207ENST00000558763 C9orf85Q96MD7 179 aa9.51□□□□□ -0.89
SMAD3-207ENST00000558763 IGLV1-51P01701 117 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 PPBPP02775 128 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 C3orf79P0CE67 100 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 IFI27P40305 119 aaPredicted RBP9.5□□□□□ -0.89
SMAD3-207ENST00000558763 FXYD7P58549 80 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 PHLDA3Q9Y5J5 127 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 NOTCH3Q9UM47 2321 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 IGHV1OR15-1A0A075B7D0 117 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 CD7P09564 240 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 Q8N1Y9 231 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 NRACQ8N912 160 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 MDFICQ9P1T7 246 aa9.5□□□□□ -0.89
SMAD3-207ENST00000558763 IGLL1P15814 213 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 LINC00315P59091 139 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 LINC00173Q6ZV60 143 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 CLUHP3Q96NS8 147 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 AP5S1Q9NUS5 200 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 KIF25-AS1Q9Y6Z4 181 aa9.49□□□□□ -0.89
SMAD3-207ENST00000558763 TRAV26-2A0A0B4J265 109 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 LINC01546A6NGU7 62 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 TNFRSF6BO95407 300 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 POM121L12Q8N7R1 296 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 WFDC9Q8NEX5 89 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 LAMTOR2Q9Y2Q5 125 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 LOC389332A0A1B0GUA5 103 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 SCGB1D1O95968 90 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 KRTDAPP60985 99 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 S100A12P80511 92 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 C9orf66Q5T8R8 295 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 TEX43Q6ZNM6 134 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 SPATA12Q7Z6I5 190 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 DEFB125Q8N687 156 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 C19orf73Q9NVV2 129 aa9.48□□□□□ -0.89
SMAD3-207ENST00000558763 IGLV2-18A0A075B6J9 118 aa9.47□□□□□ -0.89
SMAD3-207ENST00000558763 KRTAP21-3Q3LHN1 58 aa9.47□□□□□ -0.89
SMAD3-207ENST00000558763 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
SMAD3-207ENST00000558763 BEAN1Q3B7T3 259 aa9.46□□□□□ -0.89
SMAD3-207ENST00000558763 SMIM15Q7Z3B0 74 aa9.46□□□□□ -0.89
SMAD3-207ENST00000558763 TRPT1Q86TN4 253 aaKnown RBP9.46□□□□□ -0.89
SMAD3-207ENST00000558763 ZNF664Q8N3J9 261 aa9.46□□□□□ -0.89
SMAD3-207ENST00000558763 PRSS3P2Q8NHM4 247 aa9.46□□□□□ -0.89
SMAD3-207ENST00000558763 MCRIP2Q9BUT9 160 aaKnown RBP9.46□□□□□ -0.89
SMAD3-207ENST00000558763 DPH3P1Q9H4G8 78 aa9.46□□□□□ -0.89
SMAD3-207ENST00000558763 JPT2Q9H910 190 aa9.46□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms