RNA–Protein interactions for RNA: ENST00000558314.5

TPM1-211, Transcript of tropomyosin 1, humanhuman

TSL 1 (best)

Gene TPM1, Length 1,031 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-211ENST00000558314 PSMG3Q9BT73 122 aaPredicted RBP10.46□□□□□ -0.73
TPM1-211ENST00000558314 TMEM167BQ9NRX6 74 aa10.46□□□□□ -0.73
TPM1-211ENST00000558314 FXYD6-FXYD2A0A087WZ82 144 aa10.45□□□□□ -0.74
TPM1-211ENST00000558314 LGALSLQ3ZCW2 172 aaPredicted RBP10.45□□□□□ -0.74
TPM1-211ENST00000558314 Q5BKY6 102 aa10.45□□□□□ -0.74
TPM1-211ENST00000558314 Q5VSD8 79 aa10.45□□□□□ -0.74
TPM1-211ENST00000558314 AQP10Q96PS8 301 aa10.45□□□□□ -0.74
TPM1-211ENST00000558314 GAGE12JA6NER3 117 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 IGLV2-11P01706 119 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 GAGE1Q13065 139 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 GAGE4Q13068 117 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 GAGE5Q13069 117 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 GAGE13Q4V321 117 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 LINC01556Q5JQF7 62 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 RPL7L1Q6DKI1 246 aaKnown RBP10.44□□□□□ -0.74
TPM1-211ENST00000558314 INO80EQ8NBZ0 244 aaPredicted RBP10.44□□□□□ -0.74
TPM1-211ENST00000558314 ATP6V0E2Q8NHE4 81 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 C9orf85Q96MD7 179 aa10.44□□□□□ -0.74
TPM1-211ENST00000558314 BORCS7-ASMTA0A0B4J1R7 106 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 TRBV6-4A0A1B0GX49 114 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 RNASE3P12724 160 aaKnown RBP10.43□□□□□ -0.74
TPM1-211ENST00000558314 FGF8P55075 233 aaPredicted RBP10.43□□□□□ -0.74
TPM1-211ENST00000558314 TIRAPP58753 221 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 SERF2P84101 59 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 SAPCD1Q5SSQ6 148 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 LELP1Q5T871 98 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 OR2T35Q8NGX2 323 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 TNFSF18Q9UNG2 199 aa10.43□□□□□ -0.74
TPM1-211ENST00000558314 IBA57-AS1B1ANH7 110 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 MGST1P10620 155 aaKnown RBP10.42□□□□□ -0.74
TPM1-211ENST00000558314 ASIPP42127 132 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 Q6ZSN1 163 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 SUN5Q8TC36 379 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 GTSF1LQ9H1H1 148 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 ARL2-SNX15V9GYD0 113 aa10.42□□□□□ -0.74
TPM1-211ENST00000558314 M0R036 132 aa10.41□□□□□ -0.74
TPM1-211ENST00000558314 CIDEAO60543 219 aa10.41□□□□□ -0.74
TPM1-211ENST00000558314 Q8N3U1 123 aa10.41□□□□□ -0.74
TPM1-211ENST00000558314 PARLQ9H300 379 aa10.41□□□□□ -0.74
TPM1-211ENST00000558314 JPT2Q9H910 190 aa10.41□□□□□ -0.74
TPM1-211ENST00000558314 IGKV3D-20A0A0C4DH25 116 aa10.4□□□□□ -0.74
TPM1-211ENST00000558314 LRCOL1A6NCL2 159 aa10.4□□□□□ -0.74
TPM1-211ENST00000558314 H3BVH4 76 aa10.4□□□□□ -0.74
TPM1-211ENST00000558314 PEX7O00628 323 aa10.4□□□□□ -0.74
TPM1-211ENST00000558314 AKR1C8PQ5T2L2 129 aa10.4□□□□□ -0.74
TPM1-211ENST00000558314 TMSB15BA0A087X1C1 80 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 CTXND1A0A1B0GTU2 59 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 A0A1W2PRE2 83 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 GRIFINA4D1Z8 144 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 FABP5P3A8MUU1 101 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 B4DEV8 164 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 LECT2O14960 151 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 GIPP09681 153 aaPredicted RBP10.39□□□□□ -0.75
TPM1-211ENST00000558314 ZNF726P1Q15940 193 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 Q8N814 137 aa10.39□□□□□ -0.75
TPM1-211ENST00000558314 RNF222A6NCQ9 220 aa10.38□□□□□ -0.75
TPM1-211ENST00000558314 A8MWV9 139 aa10.38□□□□□ -0.75
TPM1-211ENST00000558314 FAM74A4Q5TZK3 123 aa10.38□□□□□ -0.75
TPM1-211ENST00000558314 Q86TA4 180 aa10.38□□□□□ -0.75
TPM1-211ENST00000558314 C14orf178Q8N769 122 aaPredicted RBP10.38□□□□□ -0.75
TPM1-211ENST00000558314 NTN5Q8WTR8 489 aaPredicted RBP10.38□□□□□ -0.75
TPM1-211ENST00000558314 SAMD10Q9BYL1 202 aa10.38□□□□□ -0.75
TPM1-211ENST00000558314 FAM229AH3BQW9 127 aa10.37□□□□□ -0.75
TPM1-211ENST00000558314 PTH2Q96A98 100 aa10.37□□□□□ -0.75
TPM1-211ENST00000558314 TM2D2Q9BX73 214 aa10.37□□□□□ -0.75
TPM1-211ENST00000558314 Q9UF83 564 aa10.37□□□□□ -0.75
TPM1-211ENST00000558314 BOLA1Q9Y3E2 137 aa10.37□□□□□ -0.75
TPM1-211ENST00000558314 FAM74A7A6NL05 159 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 SH2D1AO60880 128 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 ARMS2P0C7Q2 107 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 UBE2G1P62253 170 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 DMRTA1Q5VZB9 504 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 CST9LP1Q5W188 147 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 DAZ4Q86SG3 579 aaKnown RBP10.36□□□□□ -0.75
TPM1-211ENST00000558314 SYT8Q8NBV8 401 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 OR11H4Q8NGC9 324 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 ZC2HC1AQ96GY0 325 aa10.36□□□□□ -0.75
TPM1-211ENST00000558314 DAZ3Q9NR90 486 aaKnown RBP10.36□□□□□ -0.75
TPM1-211ENST00000558314 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.35□□□□□ -0.75
TPM1-211ENST00000558314 A0A087WWL8 130 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 MAP1LC3B2A6NCE7 125 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 M0R381 172 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 WFDC2Q14508 124 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 ZFP2Q6ZN57 461 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 MAP1LC3BQ9GZQ8 125 aa10.35□□□□□ -0.75
TPM1-211ENST00000558314 A0A1B0GV50 99 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 ARPC5O15511 151 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 TPT1P13693 172 aaKnown RBP10.34□□□□□ -0.75
TPM1-211ENST00000558314 CRIP1P50238 77 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 FAM162BQ5T6X4 162 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 HIST1H2BAQ96A08 127 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 IL36BQ9NZH7 164 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 PHLDA3Q9Y5J5 127 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 URGCP-MRPS24S4R325 110 aa10.34□□□□□ -0.75
TPM1-211ENST00000558314 FAT1Q14517 4588 aa10.33□□□□□ -0.76
TPM1-211ENST00000558314 TRAV8-3A0A0A6YYJ7 113 aa10.33□□□□□ -0.76
TPM1-211ENST00000558314 KRBOX1C9JBD0 128 aa10.33□□□□□ -0.76
TPM1-211ENST00000558314 LAGE3Q14657 143 aa10.33□□□□□ -0.76
TPM1-211ENST00000558314 TMEM70Q9BUB7 260 aa10.33□□□□□ -0.76
TPM1-211ENST00000558314 FAM30AQ9NZY2 134 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms